FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R07.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R07.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTACACTCTTCTCCAAAGGACGAAACACCTCTACAAGAAAGTGGGCA14.0No Hit
GATAGCACCGTTCAAGAGGAAAGGACGAAACACCGGTAGAGTATTTGCGC14.0No Hit
GATAGCTCCGTTCTTCAGGAAAGGACGAAACAACGGATTCTGACTCTCAC14.0No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT14.0No Hit
TAAGTAGAGTCTTCAGCAAAGGACGAAACACCGAATGGTGGCGGACACGA14.0No Hit
GATAGCTCCGTTCTAGTGGAAAGGACGAAACACCGAGATCGACCACCTCC14.0No Hit
TAAGTAAACTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGCT14.0No Hit
ATACACGAACTCTTGTCGAAAGGACGAAACACAGACAGGAGCTTATGTGT14.0No Hit
TAAGTACAGTCTTCACGAAAGGACGAAACACCGGCACTGGCTAAGTCAGA14.0No Hit
ATAAACCAACTCTTCAGGAAAGGACGAAACACAAACATAATCTGCCGCAA14.0No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT14.0No Hit
TAAGTAAAGTCTTCAGGAAAGGACGAAACACCTAACCACTACCAACTGCT14.0No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCATCAAGAGTACACCGC14.0No Hit
TAAGTAGACTCTTCAGCAAAGGACGAAACACCGAACCACTACCAACTGCT14.0No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCTCAGATGGTGCATCTGAC14.0No Hit
GATAGCTCGGTTCTTCAGGAAAGGACGAAACACCAGGACACGGGCCGCAA14.0No Hit
TAAGTAAACTCTTCTCCAAAGGACGAAACACCGACCCATAGTAAACAGAA14.0No Hit
GATAGCACGGTTCTACAGGAAAGGAACGAAACTCCGAACGGGCACAGTAC14.0No Hit
TAAGTATACTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGCT14.0No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGCAGTTGATGAACTTCG14.0No Hit
GGGTGGAGGGGGGCCGGGGGGGGGGGGGGGGGTGGGGTGGGGGGGGGGCC14.0No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAGCTGGCCACAGGAGCT14.0No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGACCTCCGCTAACTCTCC14.0No Hit
TAAGTATACTCTTCAGGAAAGGACGAAACACCGGACAGGCTGGCTCGGCC14.0No Hit
TAAGTATACTCTTGAGCAAAGGACGAAACACCGGACAAACGTGGGCGAAG14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)