FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R05rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R05rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAAACTAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC220.0No Hit
ATACACGATCTCTACACGAAAGGACGAAACACCGAACAACTACCAACTCC110.0No Hit
ATAAACGATCTCTACACGAAAGGACGAAACACAGAACACCTACCAACTCC110.0No Hit
ATAAACTATCTCTACAGGAAAGGACGAAACACAGAACAACTACCAACTCC110.0No Hit
ATAAACGAACTCTAGACGAAAGGACGAAACACCGAACAACTACCAACTCC110.0No Hit
ATACACTAACTCTTCACGAAAGGACGAAACACAGAACACCTACCAACTCC110.0No Hit
ATAAACTAACTCTAGTCGAAAGGACGAAACACAGAACAACTACCAACTAC110.0No Hit
ATAAACAAACTCTACAGGAAAGGACGAAACACAGAACACCTACCAACTCC110.0No Hit
ATACACCATCTCTTCTCGAAAGGACGAAACACAGAACACCTACCAACTGC110.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)