FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R02rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R02rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTATACTCTTCTCCAAAGGACGAAACACCGAACCACTACCAACTGGT15.88235294117647No Hit
TAATTACACTCTTCTCCAAAGGACGAAACACCGAACCACTACCAACTGCT15.88235294117647No Hit
TAATTAAACTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGA15.88235294117647No Hit
TAAGTACAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTATACTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGCT15.88235294117647No Hit
TAATTAAACTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCACTACCAACTGCT15.88235294117647No Hit
TAATTAAAGTCTTCAGCAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTACACTCTTCACCAAAGGACGAAACACCGAACCCATACCAACTGCT15.88235294117647No Hit
TAAGTAAACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT15.88235294117647No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGGT15.88235294117647No Hit
TAATTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT15.88235294117647No Hit
TAAGTAGAGTCTTCTCCAAAGGACGAAACACCGAACCACTACCAACTGGT15.88235294117647No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCAATACGAACTGCT15.88235294117647No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGT15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)