FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R01.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R01.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAATTACAGTCTTCACCAAAGGACGAAACACCGATGATCCCGAGTGGCCA13.4482758620689653No Hit
TAAGTAGACTCTTCTCCAAAGGACGAAACACCTGAGAAGGACGTCTCTCA13.4482758620689653No Hit
CTAAACAATCTCTTGACGAAAGGACGAAACACAATGCTAGCGCACGTGGC13.4482758620689653No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGGAAACGGACCTCTCT13.4482758620689653No Hit
GATAGCACCGTTCTAGAGGAAAGGACGAAACACCGCAGACGACACCATAC13.4482758620689653No Hit
TAAGTAAACTCTTCTGCAAAGGACGAAACACCGAAAAAACAAGATGGGGA13.4482758620689653No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACACCGCCGTGACAGGCTGCT13.4482758620689653No Hit
GGGTGGAGCGGGGCCCGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGC13.4482758620689653No Hit
ATACACGAACTCTACTGGAAAGGACGAAACACAGGAAGTGGAACCACCAC13.4482758620689653No Hit
GATCGCTCCGTTCTTCAGGAAAGGACGAAACACCGATAAGTGGAGGCCGG13.4482758620689653No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGCTGTAGAGAGTGGAA13.4482758620689653No Hit
GATAGCGCGGTTCTTCAGGAAAGGACGAAACACCGACAGTGCCCAAAGAG13.4482758620689653No Hit
ATACACTATCTCTACTCGAAAGGACGAAACACAGGCCATGCTTCCTCCCG13.4482758620689653No Hit
GATAGCCCCGTTCTACAGGAAAGGACGAAACACCGGCAGTGGGGAGACCT13.4482758620689653No Hit
TAAGTAGACTCTTGACCAAAGGACGAAACACCGAGACACGGGCCTCTCGT13.4482758620689653No Hit
GATAGCACCGTTCTTGAGGAAAGGACGAAACAACGACATCGGGGCTCTCA13.4482758620689653No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACAACGGCGTGACCCCTCGAA13.4482758620689653No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGCACTTATAGCCCATGAC13.4482758620689653No Hit
CTAAACTAACTCTACACGAAAGGACGAAACACAATGCTAGCGCACGTGGC13.4482758620689653No Hit
TAAGTACACTCTTCACCAAAGGACGAAACACCGGTGACACCGAGATTTCA13.4482758620689653No Hit
GATAGCCCCGTTCAACAGGAAAGGACTAAACACCGGAGACGGACGTCTCA13.4482758620689653No Hit
TAATTACACTCTTCACGAAAGGACGAAACACCACGCCTACTCCCTCTAAG13.4482758620689653No Hit
ATACACGATCTCTACAGGAAAGGACGAAACACAGGAATTGGGACTAACCA13.4482758620689653No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACAACGGAGACGGACGTTTCA13.4482758620689653No Hit
ATACACAATCTCTACACGAAAGGACGAAACACAGCGCATACTCCCTCTAA13.4482758620689653No Hit
GATCGCGCGGTTCTTGAGGAAAGGACGAAACACCGCCACGCTTGTGTCCA13.4482758620689653No Hit
GATAGCTCCGTTCAAGAGGAAAGGACGAAACACCGAGGTGCCCTGGCGCA13.4482758620689653No Hit
GATAGCTCGGTTCTACTGGAAAGGACGAAACACCGCCGACGCCACCATCG13.4482758620689653No Hit
TAGGTACACTCTTCTGGAAAGGACGAAACACCGACTCTTAATGGAAGGAC13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)