FastQCFastQC Report
Fri 18 Nov 2022
H3THJBGXN_n01_YP13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3THJBGXN_n01_YP13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11903273
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGGAGACGGACGTCTCTGT585360.4917639039279364No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGGAGACGGACGTCTCTG494890.4157595982214304No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGGAGACGGACGTCTCT412740.34674496669949517No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGGAGACGGACGTCTC394720.33160627333339326No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGGAGACGGACGTCT383060.32181064821415084No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGGAGACGGACGTCTCTGT240930.20240651457796524No Hit
ATACACGATCTCTTGAGGAAAGGACGAAACACCGGAGACGGACGTCTCTG219280.18421823980681615No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGGAGACGGACGTCT168350.14143168857842714No Hit
GATCGCGCGGTTCTTCTGGAAAGGACGAAACACCGGAGACGGACGTCTCT133520.11217082898123903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)