H3T5LAFX2_n02_HALO_bZIP25_Col_B_o1.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H3T5LAFX2_n02_HALO_bZIP25_Col_B_o1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1135048
Sequences flagged as poor quality	0
Sequence length	76
%GC	35

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTTTG	260	0.0015898771	10.77374	53
AGAGTGT	720	1.5752448E-7	8.267715	70
GTCGTGT	1945	0.0	7.56134	70
TGTAGGG	1255	4.3655746E-11	7.2543535	70
GTAGGGA	1085	6.4410415E-9	7.10006	70
GTGTAGG	1190	7.694325E-10	7.0620923	69
AAGAGTG	905	7.93023E-7	6.9645495	69
TAGGGAA	1070	3.6921847E-8	6.8723397	70
CGTCGTG	2140	0.0	6.8723397	69
CGTGTAG	1315	9.495125E-10	6.6579595	68
GCGTCGT	2285	0.0	6.59036	68
AGCGTCG	2430	0.0	6.340664	67
GAGCGTC	2650	0.0	6.0785546	66
GGGAAAG	935	6.639419E-5	5.9920783	69
GGAAAGA	1385	7.825711E-7	5.5621414	70
TCGTGTA	1855	1.9354047E-9	5.474475	67
AGAGCGT	2955	0.0	5.4511576	65
AAGAGCG	3270	0.0	5.247077	69