##FastQC 0.11.2 >>Basic Statistics pass #Measure Value Filename H3NH5BCXX l02n01 dn_rfp_3_march.341000000030b4.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 42496397 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.8051024890416 38.0 32.0 38.0 27.0 38.0 2 34.67720404626303 38.0 32.0 38.0 32.0 38.0 3 34.6743555694851 38.0 32.0 38.0 32.0 38.0 4 34.95441893579825 38.0 32.0 38.0 32.0 38.0 5 34.94336336325171 38.0 32.0 38.0 32.0 38.0 6 36.72442939103755 38.0 38.0 40.0 32.0 40.0 7 36.538902792159064 38.0 38.0 40.0 32.0 40.0 8 36.45776344286317 38.0 38.0 40.0 32.0 40.0 9 36.46445657498917 38.0 38.0 40.0 32.0 40.0 10 36.403252209828516 38.0 38.0 40.0 32.0 40.0 11 36.44685567108195 38.0 38.0 40.0 32.0 40.0 12 36.377325588331644 38.0 38.0 40.0 32.0 40.0 13 36.36034064252553 38.0 38.0 40.0 32.0 40.0 14 36.31719458475503 38.0 38.0 40.0 32.0 40.0 15 36.309860080608715 38.0 38.0 40.0 32.0 40.0 16 36.320682998137464 38.0 38.0 40.0 32.0 40.0 17 36.30357392416115 38.0 38.0 40.0 32.0 40.0 18 36.29057329260172 38.0 38.0 40.0 32.0 40.0 19 36.26199331675107 38.0 38.0 40.0 32.0 40.0 20 36.253205583522764 38.0 38.0 40.0 32.0 40.0 21 36.222538065991806 38.0 38.0 40.0 32.0 40.0 22 36.20500121457356 38.0 38.0 40.0 32.0 40.0 23 36.176206349917145 38.0 38.0 40.0 32.0 40.0 24 36.15732211368413 38.0 38.0 40.0 32.0 40.0 25 36.13374618558839 38.0 38.0 40.0 32.0 40.0 26 35.98731068895088 38.0 38.0 40.0 27.0 40.0 27 35.913391198787984 38.0 38.0 40.0 27.0 40.0 28 35.884652785976186 38.0 38.0 40.0 27.0 40.0 29 35.8640742178684 38.0 38.0 40.0 27.0 40.0 30 35.810789888846344 38.0 38.0 40.0 27.0 40.0 31 35.77036636776525 38.0 38.0 40.0 27.0 40.0 32 35.76200394118118 38.0 38.0 40.0 27.0 40.0 33 35.72224774726196 38.0 38.0 40.0 27.0 40.0 34 35.66195677718278 38.0 38.0 40.0 27.0 40.0 35 35.622509856541484 38.0 38.0 40.0 27.0 40.0 36 35.57981235444501 38.0 38.0 40.0 27.0 40.0 37 35.554733381279355 38.0 38.0 40.0 27.0 40.0 38 35.527897435634365 38.0 38.0 40.0 27.0 40.0 39 35.50227095722962 38.0 38.0 40.0 27.0 40.0 40 35.46852680240163 38.0 38.0 40.0 27.0 40.0 41 35.4476840471911 38.0 38.0 40.0 27.0 40.0 42 35.4177504036401 38.0 38.0 40.0 27.0 40.0 43 35.39813398768842 38.0 38.0 40.0 27.0 40.0 44 35.29050258072467 38.0 38.0 40.0 27.0 40.0 45 35.304888506195006 38.0 38.0 40.0 27.0 40.0 46 35.3265022444138 38.0 38.0 40.0 27.0 40.0 47 35.31325938055407 38.0 38.0 40.0 27.0 40.0 48 35.311128423428464 38.0 38.0 40.0 27.0 40.0 49 35.33374579967332 38.0 38.0 40.0 27.0 40.0 50 35.320876402768924 38.0 38.0 40.0 27.0 40.0 51 34.61228522502743 38.0 32.0 38.0 27.0 40.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 2201 1 0.9398430280320014 2201 2 0.22397903738513492 2201 3 0.23825579740154978 2201 4 -0.029584247921391693 2201 5 0.03817502086549496 2201 6 0.17283397207769724 2201 7 0.20547304938484956 2201 8 0.16267016465076267 2201 9 0.11233806987277006 2201 10 0.17375619742651338 2201 11 0.093979698915021 2201 12 0.08205622321592188 2201 13 0.18962617210914345 2201 14 -0.0330247762629341 2201 15 -0.0448589979874896 2201 16 -0.04247579182928263 2201 17 -0.09882638166683222 2201 18 -0.14619288223762794 2201 19 -0.13476422156350765 2201 20 -0.05960407752938579 2201 21 0.051781431704199576 2201 22 0.08310085803797307 2201 23 -0.06159646216377013 2201 24 -0.012903353448805888 2201 25 -0.084432513130416 2201 26 0.06331898306599726 2201 27 -0.13045375326792197 2201 28 -0.15653307422901008 2201 29 -0.15115925821442744 2201 30 -0.0259855606620647 2201 31 -0.005433952597869052 2201 32 -0.0946638019068402 2201 33 -0.0572097515267842 2201 34 -0.10821421423071342 2201 35 0.03464501584684143 2201 36 0.06925847304491128 2201 37 0.08170462868663719 2201 38 -0.045069974758710885 2201 39 -0.21102189641637636 2201 40 -0.18036357253642876 2201 41 -0.010839302521432614 2201 42 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0.03643241123947405 2202 11 -0.0878170219175658 2202 12 0.06006296675727896 2202 13 0.011261499837885935 2202 14 0.12843613879138616 2202 15 0.02075306303807878 2202 16 0.06128476369222824 2202 17 0.02058727418208406 2202 18 -0.0748532929163872 2202 19 -0.07870322024191978 2202 20 -0.08900294947400056 2202 21 -0.0022817895909028607 2202 22 -0.06685311381986736 2202 23 -0.008937023858187843 2202 24 0.010626361446817612 2202 25 0.07048063601167343 2202 26 0.019753695580668307 2202 27 -0.04818885052452515 2202 28 0.013609319644409368 2202 29 -0.06742450533051425 2202 30 -0.2210960559281432 2202 31 -0.13867787455602354 2202 32 -0.20311287679037804 2202 33 -0.13132660080311354 2202 34 -0.10702571045688813 2202 35 -0.10535969936066181 2202 36 -0.10124553601221464 2202 37 -0.06872408873545766 2202 38 -0.14634387694402307 2202 39 -0.24218057227274414 2202 40 -0.15378238852566284 2202 41 -0.168661159984687 2202 42 -0.11696248988759095 2202 43 -0.3398382902101318 2202 44 -0.17707113671380625 2202 45 -0.2473210339886549 2202 46 -0.2346032937277016 2202 47 -0.24713058762217344 2202 48 -0.27033136914511147 2202 49 -0.3219017577880052 2202 50 -0.18664825842064658 2202 51 -0.29683277632967986 1102 1 0.7160373777310127 1102 2 0.04577097626243898 1102 3 -0.021110423004607526 1102 4 -0.1694231542717901 1102 5 -0.08697782412856014 1102 6 -0.09685341216228949 1102 7 -0.15535431603333905 1102 8 -0.05189591714776043 1102 9 -0.11817082649925226 1102 10 -0.08620998049286754 1102 11 -0.17699074956420446 1102 12 -0.14965516075050544 1102 13 -0.23157602571149738 1102 14 -0.1828283049071544 1102 15 -0.16415317724322165 1102 16 -0.16138370025272764 1102 17 -0.1851144856989677 1102 18 -0.18917992828787789 1102 19 -0.25750265589782373 1102 20 -0.19782466856741365 1102 21 -0.17303199986850615 1102 22 -0.17989782830949252 1102 23 -0.1863178517952946 1102 24 -0.22940165050867733 1102 25 -0.24675677033360444 1102 26 -0.21596384351995113 1102 27 -0.28487367962158316 1102 28 -0.3023070497427014 1102 29 -0.2980187797138427 1102 30 -0.3539254402432661 1102 31 -0.313494411235979 1102 32 -0.347324642739288 1102 33 -0.3294621829128488 1102 34 -0.27392751743594346 1102 35 -0.30878129397572707 1102 36 -0.4181382065302799 1102 37 -0.27991818584573736 1102 38 -0.3501823897442975 1102 39 -0.4071300756855223 1102 40 -0.3714423170789658 1102 41 -0.3329053350172586 1102 42 -0.4663652822166142 1102 43 -0.45791451621275314 1102 44 -0.3695888313190352 1102 45 -0.5113422720359679 1102 46 -0.48467190188812026 1102 47 -0.49095934956679343 1102 48 -0.6265642084836784 1102 49 -0.6423241656700398 1102 50 -0.573193982696246 1102 51 -0.5226648336003663 2203 1 0.5906403955148889 2203 2 -0.015931738242009885 2203 3 -0.03652007724470252 2203 4 -0.25130102046250613 2203 5 0.02018804229978599 2203 6 -0.23164738525851902 2203 7 -0.31636756877902883 2203 8 -0.5467427294526885 2203 9 -0.21389899281098224 2203 10 -0.24469714192947833 2203 11 -0.17996589221627346 2203 12 -0.1518077406041911 2203 13 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-0.12461634881811534 1213 32 -0.3840071426724876 1213 33 -0.31938878710185037 1213 34 -0.2913457515424227 1213 35 -0.33322154997787123 1213 36 -0.14580232346618516 1213 37 -0.3652766205300111 1213 38 -0.2801469094220863 1213 39 -0.22246333945620478 1213 40 -0.2365387589007426 1213 41 -0.29804549005777403 1213 42 -0.2831061385232161 1213 43 -0.07696807318923504 1213 44 -0.06566866599631282 1213 45 -0.163517750922189 1213 46 -0.23163747972556337 1213 47 -0.17203131560683005 1213 48 -0.24588381788089464 1213 49 -0.05414294917518703 1213 50 -0.21355380360771647 1213 51 -0.49484559110168647 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 26.0 14 65.0 15 165.0 16 408.0 17 748.0 18 1639.0 19 4242.0 20 10352.0 21 25704.0 22 57912.0 23 115147.0 24 207584.0 25 337200.0 26 503862.0 27 700769.0 28 925384.0 29 1163419.0 30 1415845.0 31 1681901.0 32 1961788.0 33 2284427.0 34 2674994.0 35 3204696.0 36 4001369.0 37 5366663.0 38 7945522.0 39 7904565.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.15385788315993 24.098693761121844 15.454773346589965 29.29267500912826 2 16.007261613930122 22.045518369135713 36.52218221720657 25.42503779972759 3 18.854391793600566 24.30622352069573 30.05514867660778 26.784236009095924 4 14.644363190788765 19.308331864184993 35.90552969864936 30.141775246376884 5 15.209146358294113 35.99076853329821 32.914787183447515 15.885297924960165 6 29.99362460058451 37.50226285146086 18.04188147724685 14.462231070707777 7 25.812534177897483 32.26604128345281 21.809877199707074 20.11154733894264 8 23.88499429728125 35.409959578455556 21.307281650253785 19.397764474009406 9 23.37200492549992 16.806478911612203 24.861204115727737 34.960312047160144 10 17.354833634484354 29.047118982816357 31.140491745688465 22.457555637010827 11 33.280560231965076 24.257183497226837 23.260651955976407 19.201604314831677 12 20.33649111476439 26.97253840131435 29.2518469271642 23.439123556757057 13 27.50165149294892 22.040129660874545 24.984920486317936 25.473298359858603 14 20.816800068956436 22.90064967154745 26.032606952537645 30.24994330695847 15 23.52640154411208 29.300556938980026 23.107857826158767 24.065183690749123 16 23.027380415332622 29.800046342752307 24.376012394650775 22.7965608472643 17 21.374026132144802 28.407224734840465 27.933048065227737 22.285701067786995 18 21.651494360804282 28.050152110542452 26.968410992583674 23.329942536069588 19 22.273572980787055 27.76596095899612 27.985805478991548 21.974660581225276 20 22.76297682365872 27.13502747068181 26.885891055658202 23.21610465000127 21 22.668665298848747 27.014518430821322 26.580349858836268 23.736466411493662 22 22.947463051985327 26.897988551829467 27.47062768638951 22.683920709795704 23 22.577549339065143 27.979155503465385 26.42776986481936 23.015525292650103 24 23.484268560461725 26.86254319395595 26.786442624771222 22.866745620811102 25 23.091039929808638 27.34104258297474 26.096235876184988 23.471681611031634 26 22.481026682948208 27.183967222063632 26.17895481995165 24.156051275036507 27 22.421061419980006 27.603912575344374 26.58708293098367 23.387943073691947 28 21.955931989211667 27.60445271138478 26.559088458052603 23.88052684135095 29 22.031264339686132 27.00082596592126 27.046828267330575 23.92108142706203 30 23.01069348806022 26.469702176033916 27.752879326461187 22.766725009444677 31 22.55782673182155 27.390673336340644 26.85260265093396 23.19889728090385 32 22.372362747063757 26.45495925454215 28.01605343740675 23.15662456098734 33 21.800920965340364 26.912106808822383 27.700634255043905 23.586337970793345 34 21.593374966461557 26.25371764562521 27.697523336178477 24.455384051734757 35 22.827605918260268 25.97155666445569 27.956109017214896 23.244728400069143 36 21.266401494078565 26.50075494645246 29.074173959618836 23.15866959985014 37 21.21368917924728 25.14667317318469 28.967452207285877 24.672185440282153 38 21.232035049106184 24.560207609500743 30.18625262248293 24.021504718910144 39 20.143036190498783 24.044770947515037 31.80846307933138 24.0037297826548 40 20.46865031139879 23.472632519307002 31.569641124977437 24.489076044316768 41 19.684253103949906 24.341135759925876 31.930470599630866 24.044140536493348 42 18.433923111605548 23.2262615376987 33.47214769722808 24.867667653467667 43 18.619318973529346 23.40439246369746 33.41604690128054 24.560241661492658 44 16.925097286680284 23.57899909058295 34.656842436701154 24.839061186035618 45 16.72739631162243 22.58630488929963 35.37973567684813 25.306563122229807 46 16.034447475676046 23.660554010654515 35.971446921620206 24.333551592049233 47 15.129014116749943 23.218039239200362 36.09108007837843 25.56186656567126 48 15.474966161202246 23.547755616647404 35.591870800389756 25.385407421760593 49 13.854271906429853 24.140250456556036 36.50207053963742 25.50340709737669 50 13.082921950331128 25.070808973475266 34.6943837898487 27.1518852863449 51 13.5266020608879 25.082582520219322 34.90392001030324 26.486895408589543 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 85.0 1 147.5 2 210.0 3 340.0 4 470.0 5 685.0 6 900.0 7 1958.0 8 3016.0 9 4119.0 10 5222.0 11 8588.0 12 11954.0 13 17715.0 14 23476.0 15 32852.0 16 42228.0 17 66107.5 18 89987.0 19 116708.5 20 143430.0 21 189601.5 22 235773.0 23 290861.0 24 345949.0 25 443209.0 26 657134.5 27 773800.0 28 914275.0 29 1054750.0 30 1231732.0 31 1408714.0 32 1597996.5 33 1787279.0 34 1969373.0 35 2151467.0 36 2329945.0 37 2508423.0 38 2639397.0 39 2770371.0 40 2847516.5 41 2924662.0 42 2923045.5 43 2921429.0 44 2929450.5 45 2937472.0 46 2876712.0 47 2815952.0 48 2886101.0 49 2956250.0 50 2948437.5 51 2940625.0 52 2767534.0 53 2594443.0 54 2381631.0 55 2168819.0 56 2007748.5 57 1846678.0 58 1660877.5 59 1475077.0 60 1275353.0 61 1075629.0 62 897911.5 63 720194.0 64 597968.0 65 475742.0 66 389862.5 67 303983.0 68 245205.0 69 186427.0 70 147876.0 71 109325.0 72 86621.5 73 63918.0 74 49895.0 75 28253.5 76 20635.0 77 16262.5 78 11890.0 79 9498.0 80 7106.0 81 5155.5 82 3205.0 83 2386.5 84 1568.0 85 1203.0 86 838.0 87 629.5 88 421.0 89 283.0 90 145.0 91 112.5 92 80.0 93 49.0 94 18.0 95 17.0 96 16.0 97 9.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.07556405311254975 2 1.3883529937843908E-4 3 2.353140667431171E-6 4 2.847300207591717E-4 5 1.8825125339449367E-5 6 5.553411975137563E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 1.4118844004587024E-5 27 4.5415614881421593E-4 28 0.001157745208376136 29 0.001640139045199526 30 0.0036779588631949195 31 0.005096902685655916 32 0.007805367593869193 33 0.009476097467745324 34 0.009680820705811836 35 0.009040766444270557 36 0.007805367593869193 37 0.008525428638103131 38 0.011059761136926503 39 0.011560980099089341 40 0.0073794491330641514 41 0.0073441520230526835 42 0.007520637573110021 43 0.008400712182729279 44 0.005040427309637567 45 0.004821585227566469 46 0.005847554558566459 47 0.004835704071571056 48 0.0053533950184059135 49 0.00508513698231876 50 0.005026308465632981 51 0.002409616043449519 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4.2496397E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.973225224500046 #Duplication Level Percentage of deduplicated Percentage of total 1 82.16751717287482 10.659777064216803 2 6.676763970255514 1.7323832551390381 3 1.5253773586521016 0.5936719207844009 4 0.5370476274696139 0.27868959309786795 5 0.5230888590948134 0.33930747907318914 6 0.42038038299031333 0.3272213633096953 7 0.2936277190978673 0.2666508972409005 8 0.28030842231446995 0.29092034360079144 9 0.23880460599806064 0.27882593444347514 >10 3.7159820637129326 11.880580438795354 >50 1.4788297649939008 13.983755712244145 >100 2.083963650231814 53.057541786696646 >500 0.05613647238247037 4.30094770458213 >1k 0.0018769004234299685 0.37416630089044184 >5k 1.0735250785635167E-4 0.0815452494702693 >10k+ 1.8767699996164475E-4 1.5540149564149373 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTCCGAGCCCACGAGACGTCGTGATATCTCGTAT 224719 0.5287954176444652 No Hit CTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTCG 176819 0.4160799796745122 No Hit CTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTCGTGATATCTCG 57040 0.13422314367027396 No Hit CTTATACACATCTCCGAGCCCACGAGACGTCGTGATATCTCGTATGCCGTC 47968 0.11287545153533839 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA Adapter Nextera Transposase Sequence 1 2.353140667431171E-6 0.0 1.1168240921695078 2 2.353140667431171E-6 0.0 1.1204902853293657 3 2.353140667431171E-6 0.0 1.123165806268235 4 2.353140667431171E-6 0.0 1.4226641378562046 5 2.353140667431171E-6 0.0 1.4748450321564908 6 2.353140667431171E-6 0.0 1.4775676159087088 7 2.353140667431171E-6 0.0 1.488135570646142 8 2.353140667431171E-6 0.0 1.4926088910549287 9 2.353140667431171E-6 0.0 1.5800210074279943 10 9.177248602981565E-5 0.0 1.6152451700787716 11 9.177248602981565E-5 0.0 1.6355739523047095 12 9.177248602981565E-5 1.0824447070183385E-4 1.7218377360320687 13 9.177248602981565E-5 1.0824447070183385E-4 1.7510613899808964 14 9.177248602981565E-5 1.0824447070183385E-4 1.858872882799923 15 9.177248602981565E-5 1.0824447070183385E-4 1.868280739188313 16 9.177248602981565E-5 1.0824447070183385E-4 1.8720669425222096 17 9.177248602981565E-5 1.1059761136926503E-4 1.876653213683033 18 9.177248602981565E-5 1.3177587737614555E-4 1.8779521473314549 19 9.177248602981565E-5 1.3177587737614555E-4 1.8802582251855375 20 9.177248602981565E-5 1.3412901804357673E-4 1.8848492026276957 21 9.177248602981565E-5 1.3883529937843908E-4 1.891830970987964 22 9.647876736467799E-5 1.3883529937843908E-4 1.9001799140760098 23 9.647876736467799E-5 1.3883529937843908E-4 1.9102419435699454 24 9.647876736467799E-5 1.3883529937843908E-4 1.9173437221042526 25 9.647876736467799E-5 1.3883529937843908E-4 1.9339263043876402 26 9.647876736467799E-5 1.4118844004587023E-4 1.9489464012678535 27 9.647876736467799E-5 1.4118844004587023E-4 2.053658807827873 28 9.647876736467799E-5 1.4118844004587023E-4 2.446781547150927 29 9.647876736467799E-5 1.4118844004587023E-4 2.9427977152980755 30 9.647876736467799E-5 1.435415807133014E-4 3.4046556935167938 31 9.647876736467799E-5 1.435415807133014E-4 3.8781993682899754 32 9.647876736467799E-5 1.435415807133014E-4 4.468774141017178 33 9.647876736467799E-5 1.435415807133014E-4 5.342069352373567 34 9.647876736467799E-5 1.435415807133014E-4 6.485067428186912 35 9.647876736467799E-5 1.4589472138073258E-4 7.894761054684236 36 9.647876736467799E-5 1.4589472138073258E-4 9.78953109836582 37 9.647876736467799E-5 1.4589472138073258E-4 12.320060921870624 38 9.647876736467799E-5 1.4589472138073258E-4 15.263133954626788 39 1.0353818936697151E-4 1.4824786204816376E-4 18.1671589711476 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAT 43840 0.0 28.8179 45 TCTCGTA 40275 0.0 28.413582 44 ATCTCGT 42875 0.0 26.701445 43 TTATACC 33960 0.0 25.48619 8 TATCTCG 49845 0.0 22.841484 42 TATACCT 39570 0.0 21.810366 9 TATGCCG 13675 0.0 21.274677 43 TGCCGTC 13655 0.0 21.25598 45 ATGCCGT 14315 0.0 20.11888 44 CGTGATA 64070 0.0 20.106268 37 CGTATGC 15000 0.0 19.770561 41 TGATATC 58570 0.0 19.543085 39 ATATCTC 58615 0.0 19.354813 41 GATATCT 59065 0.0 19.314198 40 GTGATAT 61565 0.0 19.042088 38 GTCGTGA 68100 0.0 19.04194 35 TCGTGAT 69920 0.0 18.475527 36 CGTCGTG 72905 0.0 17.956703 34 ACGTCGT 73020 0.0 17.85757 33 GTATGCC 16760 0.0 17.546762 42 >>END_MODULE