FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n02_Tr3_NCI2c_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n02_Tr3_NCI2c_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2343
Sequences flagged as poor quality0
Sequence length101
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATGGCGCCGCGCCAGCGAGCCCAAGTGCCGTCCGATCGCTCTTGAAAC70.2987622705932565No Hit
CCGTGAACGGCGCTTCCGGCGCGGGCTGCGAGAACAACGCGATGTGATCG70.2987622705932565No Hit
CCTCGGGACCGATCTCTTCCACATCGACCTGGCGAGCCGAGCGGTAGATC60.2560819462227913No Hit
CACGTGGTGGGCCGCACCGTGCACCGGACCGCTGACGATTTCCTACGACG60.2560819462227913No Hit
GATTGCGGCGTCTGCGTGGATCGACGGTGCGCTGTGGGTGCGCCTGAGCG60.2560819462227913No Hit
GTCGATGGCGGTCGTCCTGACCTACGCCGCGAGCGTCCCCGTCGTCAAGG50.21340162185232608No Hit
CTCTCCATCTTCTTGCCTACCCCGGCCGCACTCGCGTTGTGCCAACAGGG50.21340162185232608No Hit
ACACCCGCAACCCAAGCAGCACCGTCATCACTGCCGCGTAAATCGACACT50.21340162185232608No Hit
TTGCTGCTCTATTTCGCAACCAAAGGCGCTTTCGTGTTCGGCTATGCCAA50.21340162185232608No Hit
GGTATCGAAGCCGTTGGACTGCATGTGGTTGAGTAGCCGGCAGACGTACT50.21340162185232608No Hit
TGCCTACGCTGGCTTCGTGGCCTCCAAGAACCAGACGACGTCCAAGACCT50.21340162185232608No Hit
CACCAATGGCAATCGACCTCCGATGTTGCTCTCAGGCGGGCGGCGTATCG50.21340162185232608No Hit
AAACCAGCATGAACACTGGGTTTGCGGGACGCGTGTGTCAACGTGGAGCA50.21340162185232608No Hit
GCAAACTCCAGCGGGAAGCTCAGCAGCCCCGGCGAGAGCTTGTTGTTCCG40.17072129748186088No Hit
GGTCGGGTCGATGACCCTGTTCCCGAACAACAACTCGCTCAAGGACAAGG40.17072129748186088No Hit
CAACAAGGAGTGGGTCGAGTATCACGTGAAGAAGTGCGACGTGATCCTGC40.17072129748186088No Hit
CTCGTCTACATTGTCGGTCGGGATTGCGGTTTGCGAAAAGTCGTAGAGCA40.17072129748186088No Hit
ACATGCATCCGACGATCATCTTCGACCGGCACGACCCGGACAGCTTGGCG40.17072129748186088No Hit
GCTGTGGCGCGAAGGCCTGCAACGCGTCCAGCACCTGCAGCGCCGCGGCA40.17072129748186088No Hit
CTCCTCGTGTCGTGGGTGGATGTTGCGTTGTGCCTTAACCGTGACGGATG40.17072129748186088No Hit
TGTCTGGCTTCGTTCAGAAAGTCAACGAAAACAGCCGGCAATTCAATACA40.17072129748186088No Hit
ACGCGCAACGATGGCCAGGAGATTGCCGGCGCGAGCAAGCTGGGCCGCGA40.17072129748186088No Hit
GTGCGATGCCGCTACTGTAGGTTGCTTGATTCGATCAAAAAACCACCTAA40.17072129748186088No Hit
GTCCGAGGTCTCGGCTACAAGTACGACAGCTGAGCTGAGGAGGCGTCAGC40.17072129748186088No Hit
GCTGACGTCGACGCCGGCGGCCCGCGCGGAGCGCACCCCGTCGATCTGCC40.17072129748186088No Hit
GTGCGAGGTTTCCGGTTTGCTGGATGCGGCCCGGAAGGTGGCGGGCCGAT40.17072129748186088No Hit
CTGTTTGACCACCCGGATCAGCGCGAAGGCGTGAATGCTTTCCTTGAGAA40.17072129748186088No Hit
TGCGTGAGCGCTTTCACCACGTGTTCCTGACCGACCAGCGTGGTGAAATC40.17072129748186088No Hit
ACGGGGACCCGTTTTCGTGCGATTCCGCACGCCCCCGCCCAGATTCTGTG40.17072129748186088No Hit
ACAGAGAGGCAGGCAAGGCCCGCATGGCGCAGTCACTGCGCAGCAGGCTT40.17072129748186088No Hit
TGATTCGCTGCTGCGCCAGTTCATCTATTCGGCCTGCGTACTGTTGATCG40.17072129748186088No Hit
GCGTTCTACCCGTCGTGGGGCAAACAGCGCCTGCACAACATGATCGCCAA40.17072129748186088No Hit
TCGCTGGACAGGTCCCACTCCTGGCGGCGCAGGGTCGCGTAGTACTCCAT40.17072129748186088No Hit
GGTTGTGGCTGAATTCGGTCATGAGCTGCCCTCCTGGATGGCAGAGCTTG40.17072129748186088No Hit
GCGTTCACGGCATCAACATCGGCGCCGGCGACCAGTTCAAGCCCGACTTC40.17072129748186088No Hit
CCTCCCACACCGTCAGCACCGGCATGCCGGCGATCGGCGAGGACGGGTCC40.17072129748186088No Hit
ATCCCGAGGGGCACCTCGCGCCCGTCGGCAAGAAGTTCAAATATCGCTCC40.17072129748186088No Hit
CATCGTAGGCCTTCTCCAGCGGCTGCCACACCTTGGAGCTGTCTCTTATA30.12804097311139565No Hit
CGCGCGGATCTCATCGTCGAAAATGCGTCGCTACTGCAAAGTTTGCCTTG30.12804097311139565No Hit
AGGATGCCTCGCAAGGCGGCGAACTTGGGCTGCGTCCGATCGGTCGCTTG30.12804097311139565No Hit
GGCATAGCTCGTGATGGCCTTCAGCTGAGCGGAGTCCTCGATGCCGACCC30.12804097311139565No Hit
TACGAGACGTTGATGCCGCTCATGCGTGTTTGCGCAGAGAACGCAACGTA30.12804097311139565No Hit
GGAGGAAGACCGCATCCGCCGCGACGGCATCCGCGATGCTGTACACGCGC30.12804097311139565No Hit
GTCAAGCGCGAGTTCGATCGCCTGCTTCCAGACCTCGAGGCGCTCTGACC30.12804097311139565No Hit
TGTCGCTACCGAGCAAGCCATCCGGATCGACCGCGCGAAACGCCAGCCCC30.12804097311139565No Hit
GTCTTGATGATCGCGTTGCGGCCGTCGGTCAGGCGCAGCCGCGTGGCGGT30.12804097311139565No Hit
GTGTTTGCCGGTGCGGTACAGGATTTCATCGTGCTGTTCATCTCCACGCG30.12804097311139565No Hit
ACGTACGTGTCCAGCACCCCCGAGCGTACGCGGTACACCGCGAAGTTGGC30.12804097311139565No Hit
GTCAGGAACAGGAAGACCGCGAACAGGCCGATGCCGACGAAGGCGACGAC30.12804097311139565No Hit
CGACGGCCACAGCGATCAGGACCCAGACCCACCACGAGATGTCAGACATG30.12804097311139565No Hit
GTATCTGTGCATCGCCGTCACTGGAGTGTGTGGACGCGGGATGCGGTTGA30.12804097311139565No Hit
CCGTTGCGCAACCCGCGAAGGCCAAGTTCCTCAAGCTGCTCGAGACGATT30.12804097311139565No Hit
GGTTTGAACTGCTCGACTCACAACTTGCGGTTTCTGAGCTGATCGATCCA30.12804097311139565No Hit
CGGCACGGCTGGATGCGCGGCGCGGGCATGTCGTGATCAGCGGATACGAC30.12804097311139565No Hit
CATAAGGGGCGATGGCGCGGACGTACTCGGGGCCGAACTGCAAAGACATG30.12804097311139565No Hit
GTCGGGTGCAGCGGCGTCATGGCGGAGAACTCGACGCGCTTGCCGGCCTC30.12804097311139565No Hit
CTGATCGCGATCGGGGGAGAGGACACCCTGGGCGTCGCGACCAAGCTGGC30.12804097311139565No Hit
GGTAGTAGTCCAGCGTGTAGAGCCTCTCGGCCGGGTCGGACAGGTCGCCG30.12804097311139565No Hit
GTGGCGCGTGCTGGACGCCGCGAGGTCGATCGCCGGGAAGATGCGACGGT30.12804097311139565No Hit
CCCTTGTCGGAATTGCCCCGCTGCCAGCGCGAGGCGATGAAACCCAGCAC30.12804097311139565No Hit
GTGAGGAACTCGTGGTCGGCCTCGAGCGAGTCGAGGACGGCGTTGAGCGA30.12804097311139565No Hit
CTATCCCGAAGTGACGTTTGACGTGGCGTTGTCCGACCGCCCGATCGACA30.12804097311139565No Hit
CCATGGGGATCGCGACCTTGTCGACGACCTTGTCCCAGTCGACCGTGACA30.12804097311139565No Hit
CGTCAGGGGTGCCGGGCAGGGCGAGTCGGCCACCGGTCAGTCGATCGTCG30.12804097311139565No Hit
CTGGAAAAGAACATCGGCTTCCTGATCGTGCTGACGCTGGTGGTGGTCAG30.12804097311139565No Hit
TCGGCAAGTACGCCAGCAACAGGCGTCTTCCGCTCACTGCGGGTTTTCAA30.12804097311139565No Hit
GGTGGTGCTCGGCCATCCAGGTCGAGATGCCGGCGATGAGGCCGCCCCCG30.12804097311139565No Hit
AAATATGGGCAAGTTTGAACATGGCGGCAGAGATAACCTATGATATGCCG30.12804097311139565No Hit
CTTCGTGGGCGAGGCGCCGCCAATCGCCGCATTCGGGTACGGCTTTTTCG30.12804097311139565No Hit
GCGCTACACCGAGTGCAAGCTGGCGCCCATCGCGATGGAGATGGTGCGCG30.12804097311139565No Hit
ATGTCGATCTGGTCCTGGTACGGCGCGTCCGCGCCACCGATGTTCGGGTC30.12804097311139565No Hit
CCCCGGTCCCGCCCAGCGAGTAGGCTCGAGGCATGGGACGTTTCAGCAGG30.12804097311139565No Hit
CGATGATGAAGGTCTCCGACCCGATCATCTTCGGGCACGTCGTCAAGGCG30.12804097311139565No Hit
GCCAAGGCGTCGAAGTTCTTGCCGAAATGCTTCGGGAACAGAAACTCGCG30.12804097311139565No Hit
GTGCATTACCTTTTCTCAGGAACTCAAGCGCTACAGGCAATCCGCCCACA30.12804097311139565No Hit
CTGCTGCGCAGCGCCCGCAGCCTGAAGCCGACGCCGGAAGGCCAGCTTTA30.12804097311139565No Hit
CCTGATGGCATGCGCCTGACGGTTCAGGCGTCGAGCCGCAGCGCCATGTG30.12804097311139565No Hit
TGTGCATACAATCCGTTGGAGCTCGTCCTTGTGACGGGTGACAGCGTGCC30.12804097311139565No Hit
GCGTACGTCACCGGCGCCACCGACGGGTTCCCCGAGGAGTGGGAGCTCGA30.12804097311139565No Hit
GCCGACATCCGCGCCGCGGCTGGCGCGATGGCGGCGCAGGCCGGCAATTG30.12804097311139565No Hit
GCCGTGGCGGGTCTGACGTCGGTGATCCTGGTCGACATCGTCGCGATGGG30.12804097311139565No Hit
TCTTGACCGAGTATCCGTCGACCTGCTGGAAGTAGGTCGGGACCAGCAGC30.12804097311139565No Hit
ATCTTCCACCACGCGATGTCCGTGCGTGTTTGATGGAGCCATCCAATGAC30.12804097311139565No Hit
TATCAGTACGACGCTAACGGACAGCTCACCCAGATTCGTAGCGGCGTGAC30.12804097311139565No Hit
GCAATACCCGCCTTCGCATCCATTTGCTGTTTCAGTCGCTCCAGATGCGC30.12804097311139565No Hit
TCACCCGCCGGCCCCACGCGGTGCACGGCCGAATCCAGCATATCGACGTC30.12804097311139565No Hit
GTGTACGCGAGACCGTTGCCCAGCACCTGTTGGGCGAAGCGCTCGAGGCC30.12804097311139565No Hit
GGCTGAGGCGTTTGGTCCAGTGAGGTGTGTACATGTCTGGCTCCCAACCG30.12804097311139565No Hit
AGAACGAATAATCGCCCTTCTGCGCGCCCTCCGGCTTCAGACCGCTGGCA30.12804097311139565No Hit
GCCACCGAGGGCCTTCATGCGCGGCCAGTAGGCACGGCGTCCGGCCAGGT30.12804097311139565No Hit
GCACGAACTGCAGCAGATCGCGCATGTCGTGGCCGGCCGCGGTGGGCGCC30.12804097311139565No Hit
ACCGAAGTCGAAGCCCGCGCCCGAGCGCTTATCCGGCGCAGCCACGGCCA30.12804097311139565No Hit
GGATTACTCCCCGCCGCCCCTCTTCAAGCAGGGCCCGTCCGCCACCGCGC30.12804097311139565No Hit
TTGTTGTACGTTAATTACTACAACCGCATATTAGGGGTTTGTTAACCATA30.12804097311139565No Hit
CCCTGGGGGACGCCCGCAGGGACGGCCTGGACGCTCGCCGGCTGCTCGAA30.12804097311139565No Hit
CCTTTACCTGCGCGCCGTCTGGCTGCGCAACCAGTGATATCGACACCATG30.12804097311139565No Hit
CATGCGTTTCATTCGGTTGCTCCCAAAAATAGGTGTTCCACGTTATTTTT30.12804097311139565No Hit
ACCCAAGGGTTGGCTCAAAGCCATGCGCGACGCCGCCCGCGAGCTGGACA30.12804097311139565No Hit
TGATGGATGTTCTCGTCCACCGTTGGATCGGCCAGCAGCTTGACGTGCGT30.12804097311139565No Hit
CGCCTACCAGAAGAACGCGATGGAAGAAGGCGAATTCGTTGCGGGCCTGC30.12804097311139565No Hit
GCCTTGGCTTCGTCCAGATCGTGCGCGCGCACGGCGGTATCTGCCAGCAC30.12804097311139565No Hit
CTCATGGGCCTGGGCCTCCAGCTCGGCCATGCGCAGGCCGAACTCGCTGG30.12804097311139565No Hit
CCTTGGGTTTTGAGGGTGTCCAGATAGGCGCCCAGGCGGTCGAAGTGCTG30.12804097311139565No Hit
GTGTACGCAATCGTGCGCAGTGGCGGCAGCCAGCAGAAGGTGGCCGTCGG30.12804097311139565No Hit
ATCTAGGAGCCGTCGGGGAAAGGCGCTGTCAAACGTGGTCAATTGCTCCG30.12804097311139565No Hit
CCGTGATGTCCATGCCGCGCGAGCGGTCGATCTTGTCCTGGTCGATCTCG30.12804097311139565No Hit
GTTCTTCGACTACACCAACGGCTTCCACGACGCGGCCAACGCGATCGCGA30.12804097311139565No Hit
GATCCCCAGGTGAACCCGGGAAACTGCGCCGGCGGTCGTCCCAGGTTCAA30.12804097311139565No Hit
CATCAGGGAGTGACGGCACTCGTCGGCGATCTCGGTCAGGGCGAACTGGA30.12804097311139565No Hit
GGGCTCGCTCGCGCCGTTCCTGAGCTGGTACCTGTGGACCTACACGCTGA30.12804097311139565No Hit
GTGCAGTACGCGCGAAAGGTGCGGGCGTGCAAAGCCAAGGTGCCGGGCTA30.12804097311139565No Hit
GCCCTTGGGTGCCGCTGCTCCCGCCTTCTGCGCCACGAGATGCGGGGGCG30.12804097311139565No Hit
GTTCTCCATGCCCAGCACCTCCGTCACGTGGGTGATCCGACGCGTGCCGT30.12804097311139565No Hit
GGGGAGGACTGGGTCATCAGTGGCGCAAAGAATTCAAAAAGCGCGTCCAA30.12804097311139565No Hit
CAGACGTCCGTGAGTACACACACCTGTCCGACGAGGAGATCGAGGCGATC30.12804097311139565No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)