FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n02_141b_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n02_141b_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3556
Sequences flagged as poor quality0
Sequence length101
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAACCTTGTGGTTTTAGAGTAAGTCTGGTTTGAGTAAAGCGTCAAGC60.1687289088863892No Hit
CCTCCAGGAACTGGCCAAGGCGGATATTCCGATCTACTCGGAGACGGGCA60.1687289088863892No Hit
CAAATCCGGGCTGCGTACCCTGTTGATTGAGCCGGTCTCGCATCTGGACG60.1687289088863892No Hit
TTCAGAGAGTGCTTTGCCATGATGAAACTGCCCTGGCCTTTCCGTTGCGT60.1687289088863892No Hit
GCGAATACCAGGCTGCGCATGATCGAAGCAAAGATCGGTATCACCAAGCT60.1687289088863892No Hit
ACTCCACGGTGGTGCCGATCAGGCTCGCCACGATGACGCGGCCGCGGGAG60.1687289088863892No Hit
GGAGACGGGAAATACCGGTAGAGCGTACCCAGCGGCACGTCGGCTTTTTC60.1687289088863892No Hit
GGTTTCCAGTAAGGATCCTGCGACCCGGCGGCATCCGTGACGTAGCACGC50.140607424071991No Hit
GAGTGGGAGAACTCGCAGCTGATGGATACACCGCTGGAGGAATTCGTGGC50.140607424071991No Hit
AGACCAGGCGGCCGGCCGGGGTGCGCCAGCGCCCCGGCTTGACGGTCTTT50.140607424071991No Hit
CGGCAAGGTCTATGGCGTCACGCGCGAGCGGATCCGCCAGATCGAATCGA50.140607424071991No Hit
GTCCACCAGGACCACCGGGATTTCCTCCGCGTAGCGTTCGCGCAGGTCGG50.140607424071991No Hit
ACTCTGCGCCAGTTTGATTGTTTCGGATTTGAGCTTGAGCACTGCCATGA50.140607424071991No Hit
CCCTTGGCAGCAACGTCGATGTCTGGGAAATCGGTAACGAGATCAACGGC50.140607424071991No Hit
ACAGTCCTCCCCGTGGCACCCGACGCCGTCGAACTCCTTGACCTGACCGG50.140607424071991No Hit
GGATGAGGAAATGTAGGTCACGCCGCCCATCACCATGGCACCTACGCCGC50.140607424071991No Hit
GGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGAT50.140607424071991No Hit
TGCTGCCGGTGCTGGAAATGACGCGCCGACTGCGCCCCGAATACTTCACC50.140607424071991No Hit
CATCAGCACCAGTACGCCGGTGGCGTACGCACCGCCCTGGGCATCGACGT50.140607424071991No Hit
GTCCTGGGGACGCGCGTCGGCGACGCGCATCGACTCATTACTTGGCATCA50.140607424071991No Hit
GAATTTACGTATCCGCAACACGGCCGGGCCGGGAGCTTAAAGCAAAAAAC50.140607424071991No Hit
CCATGAACCTTTTATCACGCCTCGAAGTAAGTGCGGTCTTCCCAGGACAC40.11248593925759282No Hit
CCCCAAAGAACGCCCCGTGCGGCAGGCCCGCGGCGAACCGTGAGACGAGC40.11248593925759282No Hit
GTTTCGTGACGTCCACGCTTTCAGTCACCTGGGCTTCACGTCTCTGGTTC40.11248593925759282No Hit
GGACGGCACGGTGGTCCACGGCGGCGGTGCCGGACCCGAACTGCAGGTGG40.11248593925759282No Hit
ACGGCGACCACGTCGCCGTCGGACAGAAGCTGATCAACGGCCCGGTGGAC40.11248593925759282No Hit
CCGCTGCACCGCGACCTGATGCTCGACGCCAATTTCGTGGAAGGCGGCAC40.11248593925759282No Hit
GGGTGAAGAAAGTCCTCACCCAGCACCCCGGACTCATCTTCCAGAAGTCG40.11248593925759282No Hit
TGCCCTGGCGGGCAACGCCAAGACCAAGAGCCCGAACCTCGTGAAAAAGT40.11248593925759282No Hit
ACGCTGGTGATCCTGGTCCGGGAATGGGGAATCACGGCCCTGCGCTTCTT40.11248593925759282No Hit
CTGCTGAGAAGCAGAACGCCCTGAAGGTTCACCACCTGCGTCCCGCTCCG40.11248593925759282No Hit
ATCGCATAGAGCGTCGCAAACACCCACGCAGGCATCGGGATGGGCGGGAT40.11248593925759282No Hit
GAGGAAGTGGTCACCAGGACCACGGGATCCGCAGTATCCCGGAGCCATGC40.11248593925759282No Hit
TGTGCGTGCTCCGCAGGCTTGACATTCAAGTTGACTTTAAGCTTAGGGTT40.11248593925759282No Hit
GATCTTCCCGGGCCGTTCCCGGGCCAGTTTGTCCAGGACAGGGCTGACCA40.11248593925759282No Hit
ACCTGGGCCTGGATGGTGACGTCAAGTGCCGTCGTCGGCTCATCAGCGAT40.11248593925759282No Hit
CACTTCAGTACGCTGGCCCGCTACGGCGTGCCGCGCGGTGCGCTGACCGA40.11248593925759282No Hit
GCCAGAACCCGACGGCGATGGCAACCAGGCCCCACAGAGAACCGGTCACG40.11248593925759282No Hit
TTTCCGCTCGGGCCGCTGCACATGGCCGCCATGCTGAAGCGCCCCGTGCT40.11248593925759282No Hit
CGTAAAAGACGGGGGCCTGGGAGTACCGGATAATCCCGCCGACGGCTATT40.11248593925759282No Hit
GTCGCAAAATACTTAGCCATTCGATACCGTAGTGATTTCAACAACGTGTG40.11248593925759282No Hit
CTTCATAGACCAGGTGGTGGAGTCCGCGGGGACCCGTGGAGCCGATGTAC40.11248593925759282No Hit
GCCCGAACCGATGTCGCCGGTGAGCAGGCTGTTCGCACCGTCCAGCCGGA40.11248593925759282No Hit
CCACAATTTGGGACGCTTTGGTGCTCAGCTCGCTGATGGCGGCACGGGCA40.11248593925759282No Hit
GGACCTGGTGGCCGGTCATGTAGCGGCACTGGATCCTGAGGCCGTCATCG40.11248593925759282No Hit
TTCCCGGACCGTCCAAAGATCCAAGGGCGACGGGTAGTCCACTCCGGGTT40.11248593925759282No Hit
CCCCAATACCGGATTGTGGGCACAGCAGCTCGATCAATCCGCCGAGGGGC40.11248593925759282No Hit
GTCCAGGGCCTCAAGGTCCAGGTTCTCCGGGTCCTTCGCGGTGTTATACC40.11248593925759282No Hit
AGTCTGATGTGGTTGAGGCGGTGAAGGCCATCACGCAAGGGGGCGCCCAT40.11248593925759282No Hit
GAGAAGAGCCAGATCCAGAACCGCGCTGCAGCCATGCGCGTGCTCCAGTC40.11248593925759282No Hit
CCCTTTTACAGACGTACCGAGGCCTGCGACGAGAACCGGGACTCATATTC40.11248593925759282No Hit
CTTCGACGACTGCCAGGACATCGTGAAGGCCGTCTCGAAGGACGCTTCGT40.11248593925759282No Hit
TCCTTGTTGATGGTGAGCAGGTAGGGTGCCTGCCCTCATACGCCCTTCAG40.11248593925759282No Hit
CCGCGGCCTTGTCCTGCCAGTCCTCGGCGTCGGCCCAGAACCCGGCGACG40.11248593925759282No Hit
CCTCGTCAGTGCGGGCGTTCAGGTCGGCCAGTTTGGCGCGAATCGTGTCG40.11248593925759282No Hit
CATCAGGACCATGAGGGCGAGGTCGAGCAGGAACCCCTGGGAGGTCGCGG40.11248593925759282No Hit
GACGGGCTCCCTCAATTTATGGCCCCTGTGGGTTCTTGCCCGTAAACGTT40.11248593925759282No Hit
GCCCAATGCGGTGGCCGCGGTGGCGGGCTGGAAGGAAGTCCAGGGCCGGG40.11248593925759282No Hit
GGCGCATGCTGTGCACCCGGCAGGCTGCCGTTGGCGAATTCCTCGGGTGT40.11248593925759282No Hit
CTGACCGACCACTACCTCATCGAAAAGCTTGCCCAGTTCAACCGCGAACG40.11248593925759282No Hit
GCCTGGACGCATCCGGCTCCATGAGCAGCGCCGACGCCGCCGTGGTGGAT40.11248593925759282No Hit
TTTCAGCGCACTGCGCAAGCCGCTGGCGCTATATCAGCACGGCGATGCCG40.11248593925759282No Hit
CCATGTACCCCTTGATCCAGCGGGTGCGCTGCTTGATCCAGGCAGGCACC40.11248593925759282No Hit
GCCAAGGATGGGCATCCCGATAGTCCCGCCCACATCCGTGTACGCCGTCA40.11248593925759282No Hit
TATCCAGCGCGGCGGCGAGCCCACGGCTTTTGACCGGGTCCTTGCCACCC40.11248593925759282No Hit
ACTGGATGGCTAATGGGCCCTACAAGGTTACTGACGTCAGCCAAACTCCG40.11248593925759282No Hit
GGGAAGCAGCGGAGGCGGGAAAGACAGCGTCCGCACGACCGGCGGACGCG40.11248593925759282No Hit
TCTTTGCCCAAAGCTTTTTCGCTAGAAACCACATCCCCGTTCGGGATGCG40.11248593925759282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)