FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n02_124b_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n02_124b_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5107
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAAGCATGATCTGCAAGAGTTCATCGATTCTACGACCCCTTTGATTC80.15664773839827686No Hit
GTTTTTGTTCCTTCATATCATGGAAGAGGATCACCTCTTGATGATGGAGA80.15664773839827686No Hit
TCTCCCTTGTCCTCGCCAGGCAGATGCCGGCGCTGGATATAGGCCTGAAC80.15664773839827686No Hit
GCGTATATATGAAAGAGAAGGACAAAAAAAGACTTGCCCTCCACACATTA70.13706677109849227No Hit
TCTCTGTATTGTGCAATACAGAAACCACGCCTGAAACAAGGCCCCGAAGG70.13706677109849227No Hit
ATAGAGAGACGGTGGGATCATTAAATTGAAAAAATTGAGTCTAGTTTTTA70.13706677109849227No Hit
TTTTTAGTATGAGCAAAAATGTCTGTTTCATGTTTGCTAAAACTTGCTGG70.13706677109849227No Hit
CTCGATGAATATTCGTGCGCGTCATCGGCCGTCGTGAGCCATGCATCATG60.11748580379870766No Hit
CTACGGCACGCAGGCCACCGCCAACCTGCTGCAGATGCAACGCTTGGGCC60.11748580379870766No Hit
GCTTAAATTCCTTCGTTAAATCACGATCCTTTCGGACAAAATCGACGAGA60.11748580379870766No Hit
ATCCAATGATTAACTTAGCTCTACTTTTTGTTTAGTATTTAGTCGGGGGC60.11748580379870766No Hit
ATTCTCTATACACATCATCTACCGTTTCATAGTATAAATCCAGCTTATGA60.11748580379870766No Hit
GCCTAAATCAGGTGCAATGTGACGGATACTTCCGGGTGTTTTTTCAAACT60.11748580379870766No Hit
CAATATGTCGTCGTCCAAACAGAAGGTCTTAAAGAACAAGTAAGAGAAGC60.11748580379870766No Hit
CGAATTAATGTTCCTTTTAGGTCTTTGAGGAATATAGAGCAAGAAGCGAA60.11748580379870766No Hit
GGTGATACTCTTTTTGATAATGAAGGTTCGGGCATGTTTTCACGACTTTG60.11748580379870766No Hit
CCTATGCCCCCACCCAATGCCCCGCCGACCGCCCCTTGCAGGTCACCCTG60.11748580379870766No Hit
CTTTCAGCTTCTGCATCAAGCGCGCCTTGTGGGTGCTGATGGTCTTGCTC60.11748580379870766No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)