FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n01_negcon10_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n01_negcon10_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2296
Sequences flagged as poor quality0
Sequence length101
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCTTGTCTATACGCCAGACCCTCGACCAACGGCCAAACTGCGCAGCGC170.740418118466899No Hit
GCATCGGCCATCACGACCTCGGGCGCGTGGTCCTTGACCGATTTGAATTC70.3048780487804878No Hit
TCGAAAGCCCGCTCGAAGCGTGCGACGGCGCGCATCTGGTGACCACCGAC60.2613240418118467No Hit
GAATCAACGGCGTACGCCCAGGCGGCGAATTGTGGGGCTTTATCCCGCCC60.2613240418118467No Hit
GTGTCGCCATCGCGCTGATTGGCCTGGTTTCAGGCGGCACCACGTTCGGC60.2613240418118467No Hit
GTGCTGTACGGCGAAGGCGCGACCGGCGCGGTGGTCAACGTGATCCCGAA60.2613240418118467No Hit
ATCCCGAGCAGTTGATCGCCCGCCTGATCGAGCAGCACTACGAGCGGGTG60.2613240418118467No Hit
CGCATAAAGGGGTGGCAGTTTTCCAGCCGCACCGTGCCCTGCGTCGCCTT60.2613240418118467No Hit
CGCAGAAGGCGTTGAAACCGAAGCGCAAATGCAGGCTCTGGTAAATCTGC50.21777003484320556No Hit
CCCATAAAACAATGAGCACCCTGTTGCTTCAACGCTCTCGCTCGGTGGGC50.21777003484320556No Hit
GTTCGGGCTCCCGCTCCATCGCCAGGCGCACCTTCGCCTGCGTCTGCGGA50.21777003484320556No Hit
TGGCTGGCATCTGAAGAGTCTGGCTTCTCCACCGGCGCGGACTTCTCCCT50.21777003484320556No Hit
GTGCTTGCCCGAGAGCTGCAGCAACTGCGCAACCAGCTTCGCGACGACGG50.21777003484320556No Hit
TGGCAGCACTGGTGGCGCGTTGTTGGACAACGCCCTCCGTCCGGTGGGCG50.21777003484320556No Hit
GCGTCCTGACACGCATAACCTGGGCGCGGACGTAGAACTCGAAGATACCG50.21777003484320556No Hit
GATAGGCCATGATGCGTGGGGGACGGGAATCAAGGCATTGTAATGCAGCC50.21777003484320556No Hit
TCGCCGCTGCAATTGCTGCACCGGCTGCGCGTGGAACGCGCGTGCCACCT50.21777003484320556No Hit
TCATCATTGGCCGTGAGATCACCATCTCCGCACTGCGTGAGTGGATGGCG50.21777003484320556No Hit
GCCCTGCCGTCCTTGCCACGGCGGGCACCGTCAAGAGCGAGGCATACCAG50.21777003484320556No Hit
GATCCAGACCGTGATGCGTCGATTCAACATCGAGAACCCCTACGAGAAGC40.17421602787456447No Hit
CCTGTACATCGTCCAGACCGTGGCCCTGACCAATCTCGGTAATGCCCAGC40.17421602787456447No Hit
ACATTACCCAGTCGCCCATCTGGCTGTAAAACGGATGGCGAAACGTGGCG40.17421602787456447No Hit
GGCATCGGCTTCTCGCTCAACAACCCGATGCTGATCATTGCCGGCTCGCT40.17421602787456447No Hit
ATTCAAAGCGGCACCCCGAGTTCATTACTGTGCGGGATTCTCCTTGAGAG40.17421602787456447No Hit
GTGTGGTGATGGCGCTGGTGATCGCGCCGAAGCCCGCAGACGAAACCGAG40.17421602787456447No Hit
GCTTGTGGCGGTGAAATGTGTGAGCAGGACGGGCTTCACTGGAGAGATTG40.17421602787456447No Hit
GGATGTGGTGCTCCTCAGCAACGGCGCGGTCGACACCCCAATCGATCTTG40.17421602787456447No Hit
GTGCTGATGATCGGCGTGCTGCTGCGCTTCATGGACAGCTTCATGATCTA40.17421602787456447No Hit
ACGCAAGACTGCCCGGAAGGCAATTTCAGCGCGCTGCGCGCCGCCGGCAA40.17421602787456447No Hit
ATACGGCGGCGCGCGTGGGCCAGCTTGATCTCGCGCAAGCCGGTCCGACG40.17421602787456447No Hit
CGCACGCGCTGCTTGCAAGCGGCCTCACGCCCGGCGACAAGGTCGCGATG40.17421602787456447No Hit
ATGATGAACTCGATGCCGGCTGCGCGCAGCCTGTCGGCTGCCGCTTCCCA40.17421602787456447No Hit
CCGCAGGCGCGCTTGCCTGGCTCGGTGGCGCAGCGGTGGGCATGGGACTT40.17421602787456447No Hit
GAACACGTTCACCGGTGTGCCCTTCACGGGCGTAGACCGCGCAGTCTTTC40.17421602787456447No Hit
ATCGCGCTGTTCAACATCGACGGCGCGGTCTACGCCATCGACAATGCGTG40.17421602787456447No Hit
CACCTCGATCGGCGCCTTGCCTGCTTTCTTCTCGATCTGGTCGAACGCAC40.17421602787456447No Hit
TCGTCCAGATCACGATGAAGATCAGCAGGAACAGCGCCACGCCGGCCTCC40.17421602787456447No Hit
GGCTGATCCTTCCCCTGTGGCTGCACCGGCTGAACAAGCGTCCGGGCGGG40.17421602787456447No Hit
CAATCAAGGTGACGGTGGTGCTGCTGTTTATCGTTGTGGGCGTGCGCCAT40.17421602787456447No Hit
CACCGGAACTGAGCTTCATCTGCCGCGTCGGCCCAGTCAGCCGCATGGCG40.17421602787456447No Hit
GTATACACTTCCGCCCACTTTGAACGCGTCACGTAGTCTTGATACTGCGG40.17421602787456447No Hit
GATCAATGGATGCTCGCCCACCTGGAACATGCCGCCTTGGCTGGTGCGCG40.17421602787456447No Hit
ACAGATGCAGTGGAGGAACGCGCTTGAAGACGGAGGACATGCGGGCGGTC40.17421602787456447No Hit
GCGCAAACAGCACGTACACGCCTTCCTTCTGCAGTTTCTCGATGTCGTCC40.17421602787456447No Hit
GGGCTCGCAATTATAAGCCAGGCAAAAGCCAGCGCGGCGCAGGTTAGGAA40.17421602787456447No Hit
CATCTGAGCCTGTGCGCTCAGCATTCCATTCCCACCGTATTGGAGTCGAT30.13066202090592335No Hit
GCCGAAGTGCGTAACCAGCACGCCGCCCGCCGTCGGCCCAATCGCCATGG30.13066202090592335No Hit
CTTGCAATGTTGCGCCGATCGCGTACGCCCCGAAGCGCCCGCTGATTTCG30.13066202090592335No Hit
GCGCGCGGCGCCTGCATCTGCCCGAAGAACACGTTGCTGGAAAGCTGGAC30.13066202090592335No Hit
TTTTTAGACCGCTCAAAATTGGTGAAATGTCCTGTGCCTACATCATTATA30.13066202090592335No Hit
GCCTATCCCGACGAAGAGAGCAATGCGGTGGGCGGTGTGGAGAAGTTCTA30.13066202090592335No Hit
GACAGATTCCACTCTGCCCCGGTGCGCGGCTCATGAGACCTGGGTTGGTT30.13066202090592335No Hit
GTACCGCGGCCGCGTCGAGCTAAACTCGATGATGCTGTGGACGATCGGCT30.13066202090592335No Hit
GGACTACGCTGCGTTGCGTGTACAGACGGTCCTTCATCGAACGAATCGCA30.13066202090592335No Hit
GACAAGTTCCTCACCGAACTGCAGGCGCAGCTGGAAGACAAGCGGGTGCT30.13066202090592335No Hit
CTGCAAAAGATCGGCAACGCGCGATTTTCGCACGGCTGCGGGGCGGGTAG30.13066202090592335No Hit
CAGATAGGCCATCGGCTCGCCGGCCAGGCGCCGCGCCGCAAGTTCGCTGA30.13066202090592335No Hit
CTAGTTTTTGCATCAACAATCTGACGCAACCCATTGATTCATGATGCTTT30.13066202090592335No Hit
GTCTACGCCGACATGCTCAACGCCCTCGGCGGCCGCCCGCTGATCGTGCG30.13066202090592335No Hit
GTCCGTGCCGGTGGCCTGACTATCCGCCGCTGTGGAGTTGGCGTGGAAGT30.13066202090592335No Hit
CCTGGGCGACGAGGCAATGCATTGGGCAGTGCTGCTTTCGGTGTTGGGTG30.13066202090592335No Hit
CGCTTGCCCTCAGCGGTTGCACACCTGGGCAGGTGACGACTGCGTCTGCC30.13066202090592335No Hit
GAATACCACCGCGAGGGATCGCTGTTTTTTGCTGCGCACCATTGTTCGAA30.13066202090592335No Hit
GTGCTTCGTTTTCCTGAGCGGTAAGTCCGGCTCTGCAGGGAGGGCTGCAT30.13066202090592335No Hit
TCACACCACAGACGCCCAGCACGCCTGGTATTCCTGTGTCGTGTATGGGC30.13066202090592335No Hit
ACTGCACACCGTATCGGGCAACTTGTTGTCGAGCAACGGCATGGTGCAGA30.13066202090592335No Hit
GGCGTAGGTTTCTGCCTGCTCGGCCAGCACCGGTTCCTCGATAAAGAGCG30.13066202090592335No Hit
AGACAAGCCCTTTCCGGCTTCGGTGATCGGCCTAGCCCCCTCTGGTGGCG30.13066202090592335No Hit
GGCATCGAGATACGGGTTCTCGTATTCGGCCACGACCACCATCAGCGGTA30.13066202090592335No Hit
CACCCGCGGCCAACAAACCGCCCGCCAGCACGGCGTCCAGATGGAAGGTA30.13066202090592335No Hit
ATTCCCCCTTAATCCATTCACGCTGCAATGTCGGCCACACCATTGCGGGA30.13066202090592335No Hit
GGCGAGCGCTTCCGCATCGATGGCGTAATGATGGAATCCCCAAAAGAACG30.13066202090592335No Hit
GTGCTTGAGTATGCCGATCACGTACGTCTTGAGGGAGGCGTTGCCGGCAA30.13066202090592335No Hit
ATCATGAAGATGTCGGTGGTGGGCGAGGCATTCCGGCAGACCTACCTGAG30.13066202090592335No Hit
GACCAGCAGGTTGGCCCGCGACAGGGCGTTGCCGGCATTGCCATTGTCAC30.13066202090592335No Hit
ATTTTATGCTGTCGCAAACCCGCTCCAGCGACCTTGAGCTGTTCATGCGC30.13066202090592335No Hit
GCGCAGGATGATGCCGGCAGCTTCGTAGCCAGTGAAGGCGCTATCCGTGG30.13066202090592335No Hit
GTTGATTCTGACCACGGATGCAACCATCGCGGACGCGCCGAAGGAAGACA30.13066202090592335No Hit
GTATGCGGAATTCATGAAAAACATCATAAAACGCATACAACAGAGCAGAT30.13066202090592335No Hit
GGTTCGATCCGGGCAAGGAGCGCGAGGCTGCCACTACCCTTATCGGTCAA30.13066202090592335No Hit
GTGGAAGTAGTAATACTCGAGGTGCTTGAACTCGGTCTTGGCGGCGGAGA30.13066202090592335No Hit
GCCAATGCATCGTGGGATCGGACCGGTCGGGTTGCTCAATCTCGATAGTT30.13066202090592335No Hit
CTGCATCCGTCAACACGCGCCTGCGGGTGCTGGACGGTGTGCTGAAATCC30.13066202090592335No Hit
CGTCGATGCCGCTGAACTGCCCACCGACGTTGTCGGAGAACGGCGGCAGG30.13066202090592335No Hit
GGAAGGCGAAGCGACATGCCCACACTCCCACTAATGGGGAATGCCGCTTT30.13066202090592335No Hit
CTTGCGGGTGGCGCCGCCTTGGACAGCATCGAGCTGCTTGCGCAGTGCTT30.13066202090592335No Hit
CGTTGACGCGATCGAGATACGCGACCACGTAACACAGCAGCAGGAACGGA30.13066202090592335No Hit
GAATTTGCGGGCCCCAAGCGCGGCTTCCGTGCCGACCCGGCTGCACCGTG30.13066202090592335No Hit
TATCATGCCCCGGCGCGAACTGCGCTGGAGTCGGGTAGCCGAGCGAGCCT30.13066202090592335No Hit
GATCACGCCGAGATAGTCGATCAGGCCGGTTTCAGACATCGCTTGCGCGA30.13066202090592335No Hit
GCCGCATACGATTGCACGGTCGACTTCGTGTTCCATCGCAACTATCCGCC30.13066202090592335No Hit
GTTGGGTGCCATCCCGGTCGCAATTCCTGGCTCGCCTGGCTCTCAACTAC30.13066202090592335No Hit
GTCATCCTGTTCTATGCGGCGGCGCAGTCCATTGTCTCGGGCTGGATTCT30.13066202090592335No Hit
GCCGTAATACTGCTGCAGCGCCGCGGGCGACTGGTTCTGCGGATTGTCCT30.13066202090592335No Hit
GCGCTAGGAGATAGATGCCAATTTCTCTGGCATGAGCACTTGCCTCAGAG30.13066202090592335No Hit
CAACAAGCAGTACCGCGTGCTGAAGGCGGCGACGCCGGGGCCGTTCGTCT30.13066202090592335No Hit
TTTTCATTCCGTTAACATTTATAGCTGGTGTTTATGGTATGAACTTTGAT30.13066202090592335No Hit
CGCCAAGGCCCTGGCCGCCCAGGGTCTGAACTTCAGTATGGGCTTGGGCC30.13066202090592335No Hit
CGTCAGCTCTCTTATTGGGATTGTTGCGAGTTTTTACGGCGGCTATGTTT30.13066202090592335No Hit
AGCCAAGGCTGTGCGCGATCCCGGCGACGTGGCGGTGCTGCTCGATGCCT30.13066202090592335No Hit
GCCGCCCACCACGCGTGCGGCCTGGATGGAAACGCGGTCAGCGAAGTTGC30.13066202090592335No Hit
GCACAGCCGCGTTGCCGTTGATGCGCCCGCGCTTTGCGCGCGCGTCATGA30.13066202090592335No Hit
GATGGAGAGCAACGGCAAATCCGTCCAGCGCACCGGCGCGGTCATCGATA30.13066202090592335No Hit
CTGCCAAGGCGATGGGCATCAACACCCGCAACATCAAGCTGCTGGCCTTT30.13066202090592335No Hit
GCGCAACACACACGGATCCACAGCCGAAAATAGAAAGGTCACGCTTCGAT30.13066202090592335No Hit
AGCGCGGACTGTGCATCTGAATGATGACCATTTTGCCTTGCACCAGCACA30.13066202090592335No Hit
GCCATCAAGGCGCTGCGCAGCCGCTTTGGCGCGACCATGGTGTCGCGCAA30.13066202090592335No Hit
ACTTTTCCTAGGCGTTCCCCGGATACGTCCTTCCTCACGCCTCGTAGAAT30.13066202090592335No Hit
GGCACCGAGCGAGCCACCTGGCGGTAGCGCGGGACCAGGTCGATGCGCTC30.13066202090592335No Hit
CGCTGATCGACACCACGCCCACCGGCAACGCGCCCGTGACCGTGCTCGTC30.13066202090592335No Hit
CTTCGAATCTGGTCATCATGAAGAAAACGCTTACACGCTCCGAGCCGCTG30.13066202090592335No Hit
CTGCTGGGAGCGATGTAAATGGAACAGACCAACGTTTCGACGGGCATTGC30.13066202090592335No Hit
TCTTCCAGAAGCCGGCGCCGCCATCGGGCGAGCCGGCGCTCTGGCGGCGC30.13066202090592335No Hit
GTCAGGCGCGCCGGACGTTCGATCGATGCTTTCACGTCTTCACCGGTGAA30.13066202090592335No Hit
GGCGAAATCGAGGTAGTCGATCGGCGTGTTCTCAACCATGACCGTGTCGC30.13066202090592335No Hit
AGCGTTCAATGCGCTCGGCGTCGCGCTGGTCTTCCGGCGTACGCACGAGC30.13066202090592335No Hit
GCCTTGGGGATGCGCGCCTGAAACGGCCCCAGCCCGGCAGGGATCGGCTC30.13066202090592335No Hit
GTGCAACTGCGGCGGCCACCGCCAGCAAGCCGATGCTGTTGAGCACGACA30.13066202090592335No Hit
GATCACGTCGAAATGATCGGGTAAGTCTTCGATCTCTTCGATGGACGTGG30.13066202090592335No Hit
CTCATAAATCTTCTCCAGGCGGTTCAGACGCGGCCGCAGGGAATCGAACG30.13066202090592335No Hit
CTCCGTCACGTTGCGCATGACGAGCACCGGCTTGCCCAGCGACGGCGCTT30.13066202090592335No Hit
AGATGAGGGTTCCTGCTACGATCAGTGTCACACTGAACACAATAATGGCT30.13066202090592335No Hit
ACCTGAACCAGGCCATCGAGGACTTCAAGACTGCCCTTGGCGGCGAGCTT30.13066202090592335No Hit
GTTTCAAGTAACGTCCCAGCGGAATCAGCGCCGACACCGCGCTGCCGCCA30.13066202090592335No Hit
CTTGTAGCCCGCGCCTTCTTCGCCCAGCAGGCAATCGGCGGGGATGCGGC30.13066202090592335No Hit
TCGTGATGGAAGCGCTGTTTGGCGTGGGCGGCGTGATTGCTGCGCCGGTG30.13066202090592335No Hit
GCCATGATGCGAGGCGGCCATCTCGACTATTGCGTGCTCGGCGCCTTCCA30.13066202090592335No Hit

[OK]Adapter Content

Adapter graph