FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n01_Tr3_NCI2c_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n01_Tr3_NCI2c_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2343
Sequences flagged as poor quality0
Sequence length101
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGGGGTGCGTGGGGAGCCGCCCGGAGCGGTTCCCCGTTTGAGGCCCGC70.2987622705932565No Hit
TTCCACATCACGCTGACCGGCCGGCTCGACCATGCCGAGCAGCTTGCGTG70.2987622705932565No Hit
AAGCATGTCCGAGCGCCAGCGGCGGCGTGGCCGGGGGCAGGGCGATGCGC60.2560819462227913No Hit
GTCAAAGGTGACGCGATTGCGGGCATCGTGATCCTGCTGATCGATATCGT60.2560819462227913No Hit
GCGCCAGCCTTGCCCTGAACGCGGCCGGTCGCTTCGCGCAGCGCGGTGGC60.2560819462227913No Hit
GGCAAGGCCTCGATTGCGACCGACGAGATTGCACGCTTCACGCCAACCGG50.21340162185232608No Hit
CGCTTGGAACTTCATCGTCGTTGATCGCGCGAAGCTTCCTTGCATCGAAG50.21340162185232608No Hit
GCTCTTGACGAAGTCGGTGTTCCAGGCGTGCATCTGGCGCAGGTCTGCGT50.21340162185232608No Hit
GCTGTACACGTTCTTCTACGGCTCGATCCACTTCCTGATTTGGTTGCTGG50.21340162185232608No Hit
TGCCAATTGCAACCATGGGGCGGTCGGCTACAGCTTCATGATTCGGCTGA50.21340162185232608No Hit
CCTGTATGGCCTTCCGATAGCAGGTATCGGCAACATGGTCATGTGCCCCA50.21340162185232608No Hit
CTCCTCGAGCGACGAGCGGATCTTGTCGCGGAACTCGTCGTCGCTGCCGG50.21340162185232608No Hit
ATGAAAAAACCGAACGGTTCGATGCGCGACAGGCCAAGCGCCATCCGAGG50.21340162185232608No Hit
TCTGGCGGCAGCGCGCGAGCGTCGCTTCACCGGCCGGCGTCAGGCCGATG40.17072129748186088No Hit
CCTGGAAGTGTTTGCCCCGGTGTATGTGATGTTCACCAAGGCCGACCTGA40.17072129748186088No Hit
GTCGATAAGCACGGCCGGCGTCACGGGTTGACCCGTGGCCTGGGCGACGA40.17072129748186088No Hit
GAGAAGGGGGACGAGCCTGACCCTCGGCACTGGCGGAAAACGGCTGTGGC40.17072129748186088No Hit
TCCGTGGATAGCGCGGTCGATATTGCGAAGGAGTCCGCCGACATCATCCT40.17072129748186088No Hit
GTTGCGTGACGTGCCGCACACGCATCGCCTCGCGCAGCAGGAAGTGTTCG40.17072129748186088No Hit
GGTAATACACGTCGGGAATCGCCCGCAACCCGGAGAAACACAGCAGCGCG40.17072129748186088No Hit
GTCTGAGCATGTCAGTGCCTCTCGTTGATGACGGTGCCGGGGTTGAGCAC40.17072129748186088No Hit
AATCTGGCCAATACGTATCGACGGTTGGACAGGCTCGGCCAAGCCGAGCA40.17072129748186088No Hit
CAACTGCTTCGAGCATGCGTAGATCCAGCGCGGCTTGTTGATCGGGCCGT40.17072129748186088No Hit
TCCAGGTACAGATCGGCTAGGCGACCGTCCGGCAGGTCGGCTGAAGCGTC40.17072129748186088No Hit
CGACCCGAGTCTGACGCGATTCTCGTTGGCTCGCGCCAGTGCGGTGCCCG40.17072129748186088No Hit
GTACTGGTACGACGCGATCGTCCCCGACCTGCTCGACGACAAGATCGTCC40.17072129748186088No Hit
CGTGAAGTCGGGCCGCAGCGACGACCCGTGGATCTCGTCGCACCTCGAGC40.17072129748186088No Hit
GTACCCCGTCGCCGACCTGGTCGCCAAGCTGCGCGCCCGCGACATCGAGG40.17072129748186088No Hit
GGTTCGAACGCAGTACGGATTCGGATGCAAGCGGATGGGTCGCATTGAGC40.17072129748186088No Hit
GAAGTGGTGCGCCTGGCCGAGCATCGGGCCGACACCGCCCATCTGGAACA40.17072129748186088No Hit
GAGGTGGACGCTGCATCCCTCCACCAGAGGCGACGAGACAGCGCCAGACC40.17072129748186088No Hit
GGGTGTAACTGAAGAGCCAGTTCCGAATTGTTGACCGGTCCTGCCCGGAG40.17072129748186088No Hit
GCCGTGCGACAGCGCATTCAAGGCAGACGGCCGGTTCAAAGTGATGACGG40.17072129748186088No Hit
ACGTGATGCTGGAGGAGAGCCAGCTCGTGGTGCGCGGCCGGCAGGTCGAC40.17072129748186088No Hit
GTATAGGCCATGGCGGGGCCTGTCTCCAGCCGGGCCGCGTTCCCGAGCTT40.17072129748186088No Hit
CCATGCCGGTGCTGAAGGTCGATGTCGTCACGGCAGAAGAACGGCTGTAC30.12804097311139565No Hit
GCCATCAGCAGCTTGCGTTGGTTGTAGCGGTCTGCGGCAACGCCCGTCCA30.12804097311139565No Hit
TCTTGTAGCCGGTCTTGTTCTTGTACTTCTGGATCACGATCTTCGGACCC30.12804097311139565No Hit
CCACGATGCCCTCGATCCGGCGCCGCCCCAGCCACACGAGCGTCACGCTG30.12804097311139565No Hit
GAGGGCCACTACGAGATCCCGGCGACCGACCGTCCGGACGGCGACCCGAC30.12804097311139565No Hit
GTACGCAAGAGCTTTGTGCTGGGCATCGACAAGAAGCAGCTGGAAGCCGC30.12804097311139565No Hit
ATTTGGTCTCCGATCCTTGGTCTGTAAGCCTTTTTGGATTGTGCAGGACT30.12804097311139565No Hit
CTCCAAGGTGTGGCAGCCGCTGGAGAAGGCCTACGATGCTGTCTCTTATA30.12804097311139565No Hit
CATCACGCGTCTGGGACGCGCCTACAACCTCGCCGCGCCGACGTCGGGCC30.12804097311139565No Hit
TCATTGCGGTTGCTCAGCGATAGCTCCAGGCGAATCTCGGGCCACGTCGC30.12804097311139565No Hit
CCCCATGCGTCCATGACGATGTCGTGCGTGCGATCCGAGGTTTCGCCATG30.12804097311139565No Hit
GTCATAGCCGTGCACGATCCGATCGCGCAGGCCCGCCAACTGGCGGCGCG30.12804097311139565No Hit
GCGGATCATCGCGGGCATCGAGGCGTCGACGATGACGTCGCTCGGCACGT30.12804097311139565No Hit
CGTTCTGGGGCGAGCTCGGTCCCCCGATACCTGGTGGGGCGGAAGCGTTC30.12804097311139565No Hit
ATCCGGGCCCGTGCGCTTGGAGCCCCACAGGAACGGGTGATCGAACACCG30.12804097311139565No Hit
CCGCGCATCGTGATCGAGCCGCGACCCGTTCGGTACATGTTCTCGATGCC30.12804097311139565No Hit
GCATATACCGTTTCCGTCAGAACCTGATTCTGAGCGTTGTAGGTACGCGT30.12804097311139565No Hit
ATTGGGTGAAGCGCGCGCGCTGTGTCTGCTGAGAGCGGCGCACGCATTGC30.12804097311139565No Hit
GTCACGGACATACTCGCAGTAGGTTTGTGTCTCACGTCACCCTGCCGGAA30.12804097311139565No Hit
TCGTAGAGGTGCTCGCGCCACTTGCGGTCGAGCACGCTCAGGACGACCCG30.12804097311139565No Hit
CGTCGGGGCCATGGCTCGCATGGCAGGAACCGCCGCTCGCGCCGAGACGC30.12804097311139565No Hit
CCTCCATATCGCCTGTGTCCATTGCCTTGTAGACCAGCGTATCCGCGACC30.12804097311139565No Hit
GGTGAGTGTTGCTAGTGGGCCCGTCTTAAGCCAAAAGTTCTTAGTCTTCA30.12804097311139565No Hit
CGGCAGCAGCGGCACGGACGGCGTGCGGAACGGCCGCTTCATCCGCGGCT30.12804097311139565No Hit
CTTAAGATACATCGCATGATAGTGACGGTCGTCCAGAAGTCAAGGGCAGC30.12804097311139565No Hit
CTGATGGGCGGTGTCGGAACGGTCTCGGGCACGGCCATTGGCGCGTTCGT30.12804097311139565No Hit
AAGCCGCACGTCTGTTCCCGAAAAACGCCAACGTGGCGGCCACGCTGTCG30.12804097311139565No Hit
GCAGGACACCTCGCTGCTGGCCGATCTGCGTCGCTGGTCCGACAAGACCC30.12804097311139565No Hit
ATGAAGCGCAGTTGAAGGAAGATCAGAGCACACCAGAGCCTCCGGCGGCG30.12804097311139565No Hit
GACTACGACAACGTGATGCAGGTTCCCGGCCTCACCAAGATCGTCGTCAA30.12804097311139565No Hit
GAGGACGACGTCCTGGTGCCCGCCGCGGGCATCCTCGACATCCTCGACAA30.12804097311139565No Hit
ACGAGGCGCTGTGGACACCGGAGCTCAAGGACTTGCTGAAGGAGAACAAG30.12804097311139565No Hit
GCCCTCACGATGGCCGCGATCCTGAACTTCCTCGGAGCCCTGCTGGGCGT30.12804097311139565No Hit
GGTGAGCGACAGCTCGTGGCCCAGGATCAGCTGGGCGAGGGTGTCGCGCA30.12804097311139565No Hit
TCACGCGCGTGTGTGGCTTGCGCGGCGTGCTGCACGCGGCGCTGCGGGCG30.12804097311139565No Hit
AGACCGGCACGATCACGCACGGCAACCGTCAGGCGTCGCGCTTCATTCCC30.12804097311139565No Hit
GCCGAACATCTGCCTGCAGATGCTGCTGCGCGGACGCAACACCGTCGGCT30.12804097311139565No Hit
GGTACGACTCGTGGAATTCGTGCCGAGCATGCAAAACGGCTGTCGCGCAT30.12804097311139565No Hit
TCTTCGTACAGGCGCAGCACTTCCAGCGCCACCGCGGCGCAGACTGGGTG30.12804097311139565No Hit
CATCGGCCTGCTCTACGCCCAGCGCGTCCTGCCCAAGGACGCCCCGGAGC30.12804097311139565No Hit
GCCCGGAAGATACCAGCCCGGAAGATAGGTGTGCCGCACGAGAAAAATCC30.12804097311139565No Hit
CCGGCGTCGGGGGCACCGCCCCGGCGTAACCTCCGGTCCCCATCGTCGTT30.12804097311139565No Hit
GTACAGGAATCGCTGATTCGGGTGCACAGCGAGGAACGACGGATTGGCGC30.12804097311139565No Hit
CCTGACAACGCTGCGGTGCTCTCATCGGCCTTTTTGCGCGGCCACATCCG30.12804097311139565No Hit
TCCGCATTCGCTGTAAAAAAAGCCCGGATTCAATTTCTGACCGAAAAGCC30.12804097311139565No Hit
GTCCCGGGCACCACGCCGCGGCAGAAGCGCGAGCGCATCGTGACCCTGGG30.12804097311139565No Hit
GCCTGGAGAGTCGTCCCGCGAACATCGAGGGAAAAGGGGAGATCACGATC30.12804097311139565No Hit
TGCCGGCCCATGACCTCGACGACCAGCACGCGGTGGTGCGACTCGGCGGT30.12804097311139565No Hit
GTTGTCAGTGGCGCGCATGTCGGTCAGCGGGGTGTAGTCGCGCGACATGG30.12804097311139565No Hit
CATCCCCCCAGTTTTTAACCTAGGTGGGTTCGGTCCTCCACGCGGTCTTA30.12804097311139565No Hit
GAACAATGTCGCATCATCCGGCTTATGCTTGCTTTCGGTTGGGTGCGGCC30.12804097311139565No Hit
GTCTTGAGCAGGCCGCCAACCAGAAGGCCGACGCCGTCGTGACGGGCTAC30.12804097311139565No Hit
ATCCACCACAACCGTTCCGGCCGGGTGTCTGGTGTCGTAAGTGACTTCCT30.12804097311139565No Hit
TCGTTACACGCTGCAGGAAGGGCGCGCGTGCCCGGCGCTGTCGCTGTATG30.12804097311139565No Hit
ACGCAGAGATATCGGGGGTGATCATCCCGTCGCCGTCCAGTGAGTTCGCT30.12804097311139565No Hit
GTCTGCTCACGTCGTCCCAGAAGCTGTCCTACGACCCGCAGACCGAGGTC30.12804097311139565No Hit
GCCGTCGTCGGTGCCGCCCTGCTGCTCAAGAAGCAGCCGAAGCCCGAGAA30.12804097311139565No Hit
AACCTGCTGTTCACCCGCGACTCCTCGGTGTGGCTGCGCGACCGGGTCGC30.12804097311139565No Hit
GAACGGCGTGTCGATGTGCCGCTTCGAGTCGCGCCCGGCGCGCAGCGGTG30.12804097311139565No Hit
CATTTGATCCACTCCCAACACCCGGCCGGCGCGTTCCGGACATACGACAC30.12804097311139565No Hit
GTGCATCAGTTCGGCATTGCTGGTGACAAGCGAGGGCTGCACCGGCACCG30.12804097311139565No Hit
GTTCCGGGCGCTCGTCGCCGCTGCCTCGTCGAGGAGCGGTGCCTGAGCGA30.12804097311139565No Hit
GATTGGTGTTCGACCCCGTCGGGGACGAGCTCACCGCTGCGAAGAAGTGC30.12804097311139565No Hit
ATCCTGAAGCACGCGCCGTCGCTGCTGGCGTTCACGAACCCGTCGGTCAA30.12804097311139565No Hit
ATCTGCACGTGCTGGAGGCCCAGATCGCCACACAACAGCCTCTCAGTGCG30.12804097311139565No Hit
TGCTGAGCCTGGGCAACGGCCGATTCGCGCAAGCTGCGGTTATCAACCGC30.12804097311139565No Hit
GGCGGAGGTACTACAACGAGAACCGTCCCCACTCCGCACTGCAGTGGGCG30.12804097311139565No Hit
GCACTGGTGCGCCCGCTGTTGGTGCGGCTCAGGGGCTGACGGGTGCAAGC30.12804097311139565No Hit
CAGGAAATGCCTGCGCTCTTCGGCTTTCCGTTCTTCTACTGGTACCAGTT30.12804097311139565No Hit
GATTTCGCCGATGCGGCCCGGACGGATGTACCGCACGTACACGCCCATGA30.12804097311139565No Hit
ATCGCATTCAAGAGCGTGGCGGGCGCCGGCAAGAGCCAGAAATCTTTCAA30.12804097311139565No Hit
CGCTGTCCCAGCTGCCGAAGGATTCGCCCGACTTCAACGACCTGCCGCGC30.12804097311139565No Hit
CTACGGCACCGAAGCGCAAAAGAACCACTACCTGCCGCGCCTCGCACGCG30.12804097311139565No Hit
GCGGGCCGGTATTGCCGGCCGTCTGCTGAATGCCGCCATTGCGCATGCGC30.12804097311139565No Hit
CGATGGCATCGGCGTTGACCGATTCATTGATGCTGAAGATCTTTTCTGAG30.12804097311139565No Hit
AGCACACGCTTGGGCAGCGCCGTGAAGTTGCCCGCGTATGGCACCACCAG30.12804097311139565No Hit
CCGATGTTTTCCCGGCGAAGGAACATCTACGCCACCCCGTGCCTGATGGA30.12804097311139565No Hit
TGCATCGTGTTGTGGCCGATCTCCATGTTCTCGAGGATCTTGGCCGAGCC30.12804097311139565No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)