FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n01_Tr3_C4I4b_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n01_Tr3_C4I4b_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2131
Sequences flagged as poor quality0
Sequence length101
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCAGGGGCGTGCGCGCGGGTCGTATTTGGCCAGTTGCGGATCGTCCGG90.4223369310183012No Hit
TTCGTCGCTGCCCAGGCGGGCGAGCTGGTCGCCGATTTCGAGCTGGCTCT90.4223369310183012No Hit
GCGTTCGGCGGCGGACAGGTTGGTGTTGATCAGCAGCGGTTCGCCCAGTT60.28155795401220085No Hit
TATTAATTCTTTCGGGTAAAGTTGATAGCTTGATAAGTCTTCAATCGATA50.2346316283435007No Hit
GCCTGGAAGGGCGAGCCGCCCCGGCATCCCGCTATCGATGCCATGGCCAA50.2346316283435007No Hit
GCCGTAAACGGCATATCCAGGATGACCAGGGATTTTGTGCCCCAGTTGGT50.2346316283435007No Hit
CTTCACCACGATGATCCAACGGCTCGCAGAGCAACTGCGCCGTCGTCTCT50.2346316283435007No Hit
AATGCATTCCGTTCAGAAGAAGGGAAAAACAGCCTTTCCGCTTCTTCAAG50.2346316283435007No Hit
GGGTGAGTCCTACCGCTATATTCCGGGGCTGGACACGCTGAGCATTTATC50.2346316283435007No Hit
GATCTTAATACGCGGCATTAAATATGTACCGGTTGTCGATGCAAAAGGGC50.2346316283435007No Hit
TAGTTACTGCAGCTTTTCCATGGGGACTGCATTTCAGATAACAGCTTTTT40.18770530267480057No Hit
ACATGTCCGGCGACAGCATGAGGATGGACGACCTGGCCGAATACACCCGC40.18770530267480057No Hit
GTGTTCAAAGCTCTGCGCCAGCGGCAAAAGACAGATGGCGTGCAGATAAC40.18770530267480057No Hit
GCAACTTGTCGGCCAGATAGTGAGTGAAGTCACCTTCCTGCAACGCCGCA40.18770530267480057No Hit
GCTTGATGTGATGTTTGACCTTCCATCACGTGATGATATTGAAAAATGTG40.18770530267480057No Hit
CTTCGATGGCATCGCAGTCATAGACCCGCACGTTGGTCAGGCCCTGAGTC40.18770530267480057No Hit
CGCTACAAGACCCCGTATTTCAGCCACATCATGGGCGGCTATGCGGCCGG30.14077897700610043No Hit
TCCTTTACCAAGTAATAGAAGATATTGTTCAACCAACACCTATTGTTCAG30.14077897700610043No Hit
GATATAGGAAGGAACACCAGTGGCGAAGGCGACCACCTGGACTGATACTG30.14077897700610043No Hit
GGGCTTTGCCGACCCTGATTACGAGGTGGCGTTTGGCTTCGTTACCAACA30.14077897700610043No Hit
GTCATGGTTTTCCTGCGTGACACCACCAGCGCCGAGGCGATACCGGAAAT30.14077897700610043No Hit
TGGCTGATCTATCCGCACTTCCTGGGCAACCTGCAAGGGCCGGTGGATGC30.14077897700610043No Hit
GTTTAATTCACGAGCATCAAACTTAAATTGAAGAGTTTGATCATGGCTCA30.14077897700610043No Hit
ATATACATATACAGACGTTTGCCTGCTCGGTAAACTCCGGCAATCTATGC30.14077897700610043No Hit
TTACAGGCTTGTTATTACCCGGGCCTCAGCCGTAAACTGGGACCCTAACA30.14077897700610043No Hit
GTGCTCTACCTCCGAGACTCTTACCTTGAGGCTAGCCCTAAAGCTATTTC30.14077897700610043No Hit
GCATCACTTCCGGTTCCATCGCCAGCGCACGGGCGATTGCCACGCGCTGC30.14077897700610043No Hit
GACGTACGCGGTTGGCGATCAACGCCGGGCCGAAGCGCTCTTCCATCATG30.14077897700610043No Hit
CAAGTGGCCGCTGTACAACCACACGGGCGCGATCATTGGCCTGGCCGGTA30.14077897700610043No Hit
GCCATCTCATACCATGTGACGCGATCTTGCATATGAAGCTGTGCCACTCT30.14077897700610043No Hit
ATGCTAGGCACTTTCCGGCATCTTCCGATTGGGGGCTCACCCTAGCCTGA30.14077897700610043No Hit
GAGTACCGATGAGATGCATAAGAACACCATGTGCAAAGACGGTAAGTGTC30.14077897700610043No Hit
AGTCGAAACGCTTCAACAGACGCGGCAGGATCAGTTGCTCGAAGTATTCC30.14077897700610043No Hit
TTTTAATGGAGACTTCTTTGTCTTTTTCTGGATATATGATCCTCGTACCA30.14077897700610043No Hit
ATACGACTGGGGGTAGGGGGTGTTCGCCATCCTGGAACCTCTGTTTTATA30.14077897700610043No Hit
CTTTAACACTTTTAAAATCCATTGCTTTAATGTTTCAAGACCGTGTACTT30.14077897700610043No Hit
CTGTAGGCGTCCTTGAGCGGAGCAATGTCCTTGCCCACGGACGGCCCCTG30.14077897700610043No Hit
GTTGTGCATCCAGAACGCCGCGACCTCTCGTGAATACATGGGCGTGCCGC30.14077897700610043No Hit
GCCTTTGTTCCTTTGGATTCTTGTTGTGAGGAAGGCTATTAATGGAATAA30.14077897700610043No Hit
GATCTGGTGATCCGCAAGCTCAAGTTCCTTGATGGCGCACTGGACCAGCT30.14077897700610043No Hit
CCTGATAACCGCCATATGTTGAGGTTGCCGGAATATAAGACCCATTTTAC30.14077897700610043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)