FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n01_Tr2_NCI3c_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n01_Tr2_NCI3c_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1498
Sequences flagged as poor quality0
Sequence length101
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGAGATCACCTCGCCCGATCCCGAGGCCCAGGCCGAGAAGTGGGCGGC70.46728971962616817No Hit
CGACAGCACCTCGCGGTTGACGCGGTCCATGAGGTGCGTGTTCTGGCCAG70.46728971962616817No Hit
GTCGTGCGATGTGCGAGGCTTGCGGGCGGGCACATCCGCAGCGCCGGTGT50.33377837116154874No Hit
GCTCGGGGCGCAACACGCGAAAGCCATCGGCGACGAGCCTGTCTGCAACC50.33377837116154874No Hit
TGTCTGAAAAATCCTAAAGTCCAAGCTTAACAGGTGGATTTTCCGCCCAA40.26702269692923897No Hit
AGGTAGAGCGCGTCCTGGGGTCCGGGGACGTTGGTGATCACGATCTGGTG40.26702269692923897No Hit
ATGTATTTGTGACTGGATGTACAGGACTATTGGGAAGCTATCTCGTCAAG40.26702269692923897No Hit
ATATATATTGATAATATAAATAGCTTATTAAGAAATAAAAAAGGGGTGAA40.26702269692923897No Hit
CTGTCGATGTCGGCCACGCCGATCCCGCGCACGCTCGAGATGGCGATCAC40.26702269692923897No Hit
GGCCAAGGTGGCGGATACCGACTTGACCGTCGAGATTCCGAAATACACGA40.26702269692923897No Hit
GTGCATGAGCGCCCCGTAGGCCCGCACCCGGACTGGAGCTGCCAACTGGC40.26702269692923897No Hit
GACATATGTCGTCGTGATCGAGTCCGAGCAGATCGTTGTCAAGCGGGCTT40.26702269692923897No Hit
ATCAGGTACATGCCGATGGCGCTGGAGCCGGTGGTGGTCGTGATCCAGCC40.26702269692923897No Hit
GGGGTGGGCGTAACGCATGATGATGTTCTCCTTGGCTTTGTACTTATTAG40.26702269692923897No Hit
GGGCATAGCGCGCGCCGCGTTCGATGCCGCGCGCCACTACGCCAATGAGC40.26702269692923897No Hit
GGACCGTACCGTTGCCGTATACGACCAGACGGTCGCCCAGTACCGCCAGA40.26702269692923897No Hit
CCGATCGGCGACGGTCTCGGTGCTCAACAACTCCGGCATCGTCGGCGCCG40.26702269692923897No Hit
CATCGAGATTCTGCGCCAGGACGGCCGTGCTAGCTACACAACCATGGCCT30.20026702269692925No Hit
ATCAATAAGTGGACCGATAATGTCATAGTACACGACGCCATTCGCTTCTG30.20026702269692925No Hit
GCATTACCCCGCGCTGGTGGTGCGCACCGGTTCGAATGATCCGGACGGCT30.20026702269692925No Hit
ATGAAAAAGTGGCCGGATCGTCATCCGTCTGAACACAACATGTCGACATT30.20026702269692925No Hit
GTAGTACGGTGGGATAATTTCTTTCGTCACGCCCTGCTGTGCCAGCGTCT30.20026702269692925No Hit
GATCAGGCCCGTCACGCCCACGATAACGGCGAGCACACCAATGCCCGCCA30.20026702269692925No Hit
TTCAGACGGCGCTGAACAACATCGATTCGCTTAAACAGCAAGGTCGCTGG30.20026702269692925No Hit
GATCAGCACCAATGGCCATGACCGAGTTGAACGCCGGCATCGCCTGGGCC30.20026702269692925No Hit
AGCTTATGGAGCATGTTGCATAGATCCTGACCGACATCGTGTTCGTGCTT30.20026702269692925No Hit
TTCTTCAATCGCAACTTGTTTCAGGGTGCCTATTTCTCGCGGTTGGTGGA30.20026702269692925No Hit
GCCCTAGCCGGGTCAGCCCAGCGCGACCGCGATCTCGTTGGGCACGGCGT30.20026702269692925No Hit
GCTCAATACACCGGGTGCCCGTTGATCACGCTCGGCAGCCAGGTCGAGAA30.20026702269692925No Hit
GTATTGGATAGAGCCCTACAAATGAAGCGTGCTCAGGTTCTAATACAGGG30.20026702269692925No Hit
GCGTTGGCGGAGTTATTCACGCCGCCATGCTTGGTGACGGAAAGGCCTGC30.20026702269692925No Hit
GGTAGAGGCAGTCGACCATCACGGGGCAGCCGGCGCACTGTCGATGGGCG30.20026702269692925No Hit
GGAACTCTTCGAGGGTCTCGGCACTGAGGTTGGCCTCGAAGGCCTGGGCT30.20026702269692925No Hit
ATATAAGGGCTTTTTTGTACGGATTATTTCAATCTTGAAATAATCCACGT30.20026702269692925No Hit
TCTTAACTCTACCTGTGATCAGTGAGAAAAACGCACCAAATATTCAGGTG30.20026702269692925No Hit
GTGTAGCTGTGAGTGGGAACAAAGTGTGGGGAGATAACTTTGCCAAAAGC30.20026702269692925No Hit
GGAACTGGTGCCGCAAGGCAACCTGGCCGAGCGCATCCGCGCCGCAGGTG30.20026702269692925No Hit
GTTGGTATTCGGTGAGGTCGGCCTGTCCGGGCACGCCGAAAAGGCCTCGC30.20026702269692925No Hit
ACAATATCTGTCTCATGCGTAAAGGATTCCTCTTTGACCCATTGATTGCA30.20026702269692925No Hit
CCCGTGGCCAGCAGCAGGCGTCCGTACGTGTACGCCTCGCCGGTGCTCGT20.13351134846461948No Hit
GCATGGTGGTACCTGGTTTGGCCAGGGCCGTATGTGGGCCTTCGACCGCT20.13351134846461948No Hit
GTGGACGGAGTGGTGACCGTCGGGGTGGTGACGATCGGCGGGGTAACTAC20.13351134846461948No Hit
GTGGTATACCCATCGGTGCGGGTTTCATTGGCCGGTTTGCGGTGTTGAGC20.13351134846461948No Hit
GCAGGATCACCGCGCGGTCGACTTTGTTGATGATCGCCTTGTGCTTGTTG20.13351134846461948No Hit
GTCTTCGAAGCAGCCGTCGGCGGCGTAGTAGACGTCCAGGCCCGGCATCT20.13351134846461948No Hit
TAGGTACTCCGTTCTATAAAATTACATCCATTATATCAAGCCATACTCCT20.13351134846461948No Hit
ATCCACATGACGCGGCGCTGATCGCTATCTAGCTTGTTGACCACCCGATC20.13351134846461948No Hit
ATGCAAGCGCGCTGCTGGCTGGCCAAGCCAACCCGTTCGGCACGCTGCAA20.13351134846461948No Hit
CAACGTGGTCGCCTGCGCGGTCGTCATCGTGTACGCCTTCGTCTTCGGCA20.13351134846461948No Hit
CTTCCACACAATGTGACCAATACGATTGAACGAGCTCTTCAGAGATGCTC20.13351134846461948No Hit
GAGCGGTTGATGGAGCCTTATCCGTCGATGCTTGAGCGGCAACTGGCGCG20.13351134846461948No Hit
ATTTTGTACACCTCAGAATTCCTCCTTACTCATTTCATATTCTCCTTCTA20.13351134846461948No Hit
AGTCTGTATTGGCACTTCATTGATGTTGTGTGGGTCTTCATCTTTACCGT20.13351134846461948No Hit
AAAATGCTCCAGCTCGCGCACATTCCCCGGCCAGGTGTACGCCAGCAGCG20.13351134846461948No Hit
TTATTATGTCGCGGGCCGCACGCAGGACGAGATCGCCGCTGCCATGGGCA20.13351134846461948No Hit
GAATACACCAGCAATATGTTCTGGATCGTGGGCATTGCGTTGATTGCGTC20.13351134846461948No Hit
TAAATAAAGCGATTGGGACTCCTGCATAGGCTTCAGTTCCAAGCATTTGT20.13351134846461948No Hit
AGTAGACGGTGAACCATGTCCTGTTTGTGGATCGATTCATCATGATCCAA20.13351134846461948No Hit
CGTGCGCGACATTGTGGTGGACTTGCGCGATTTCTCACGCGTCGACAGTG20.13351134846461948No Hit
GATACACGTCCGGTTCGGCCTGTTCCAGCATGTGTCCAAAGCACCAGGTC20.13351134846461948No Hit
ATGGAACACGCAGCCAGAAAGCGCATAACAAATAGGAGGCACATCGCGGC20.13351134846461948No Hit
CACCAGCAGTGGATCGAAACGGCGCATGCGTTGAAGCACCCGGCGCTGGC20.13351134846461948No Hit
GTTCTGCAGTATTCCCGCTGAAGCAGCCGAAGCCCTCGCACAAACCACGG20.13351134846461948No Hit
GTACTTTTATTGGGGCTGTACTCATCGGAATTTTGCAAAATGGGCTTGTG20.13351134846461948No Hit
CGATCAGGGCTATCACCAGGTTTTCCGGGGTCATCGCCACGGCGAACCCC20.13351134846461948No Hit
ACCAAGAACACCGCCCCATGCTTCATCATCCTGTAAGTGATCTACATGAG20.13351134846461948No Hit
TTGGACGACATCGTACTCCTGACGTCTGCCGATACGCGACGCTTCGTCAA20.13351134846461948No Hit
GTCTTGCAGCAACGTCTGCATAAATTAACAAGATGGCCCCTAAAATAGCT20.13351134846461948No Hit
CTACTGCGTCATATCGTCGTCGAGCCGCCTTTTGCGATCCTCGATTTTGG20.13351134846461948No Hit
GCCGATGACGCTCCGGTCGTCGCACATGACTGGCTGACCTACTTGCTGGT20.13351134846461948No Hit
CTTTTATATGGCATACCTACCCTTAGAACGCCCTTCGTCTCGATGCCTCC20.13351134846461948No Hit
CCCCAAGAGAGAGAATCTCGATGAAGGTCAACCCGAGCGTGAAGAAGATG20.13351134846461948No Hit
CTGGCGATGCGGGCCGACTCGGCCGGCTCGACGGACGGCGGCAACGCCGT20.13351134846461948No Hit
AACTTATGCCGCGCGCAGTAACGCGACCACCACCAACAATCCATTGTCTT20.13351134846461948No Hit
GGCGGCTTCCTTGAGACGTTCCTGACCGCTCGGCACCGGGCGCACTTCGC20.13351134846461948No Hit
AGTCGAGATTGCGCAGTTGTTGGTCGATGAAGCGCTGAACCGGGAATGCC20.13351134846461948No Hit
GCTTGTCGTACGGCGAGTGCCGCTCCTCGCCCAGCAGCGTGATCGAGTCG20.13351134846461948No Hit
GTCCAATGACATCTTTATTCTGAAGACCGAGAGGAATTGTTTCCGCTTGA20.13351134846461948No Hit
GAATCACACGGTTCGCAAAGCCATGACACAGCTGAAGGATATCGGTTATC20.13351134846461948No Hit
TCTCGAAGGGTACAAACCCCAACAAACGGCCGCACGGCCGACAAAGCCAC20.13351134846461948No Hit
CTGTTCCTGCTTGCGGCGACCAGTGCGACGCACGGTCTGGGCGTACAGCT20.13351134846461948No Hit
TATGTGTACAAGACATCAGGTGCATTTGATTTGCCGCGGAAGGTGATCGA20.13351134846461948No Hit
ATTAGAGAGCTGCCTCAGAAGAAACTAAGAAGCCAGATGGGCTATGTTTC20.13351134846461948No Hit
CATTTACCGAATGCCGCCTAAACGCGGTCGTCTGCCGTCCCGCGCTGAGA20.13351134846461948No Hit
TGGCCGACATGGATTACGGCACGCTCAAGGTCTACCCGGGCAATTACGAC20.13351134846461948No Hit
GCGCGTGCGCGCGTATCCCCCGCGCGTGTGCTGGCGCGTTTGGTGCTCAT20.13351134846461948No Hit
GTCTTCATTGCTACGCACCCGCGCCCCTTCGCTACGCAGGTGATCGATGG20.13351134846461948No Hit
CGTTCTGCCGGTACATCAACTGCGCAAACGGCACCTTTTGTGAACTGGAA20.13351134846461948No Hit
TCAGCATTTCGCCGATGTTGGTGCCAAACGCATTGTCGATCTCGCGGATG20.13351134846461948No Hit
GCCTGATCACCACCGAGCACGGAGTGCCCATGTCGGCCGCACACATCGAG20.13351134846461948No Hit
GACCAATGAGAGCGCGCTTGACGGTGGCAGGCTTGCGAAGAATGTCGAGC20.13351134846461948No Hit
CAGCATCCGCATCTATGCGTCGCGCGAGCTGGCCCTGCCCGACAACGGCA20.13351134846461948No Hit
GCGCAATTGACCGAAGCGCGCGAGCGACTGCTGCGCGAGCAACGCATCGA20.13351134846461948No Hit
CTACGACACCTTGATGCGCCAGAGCCTGGACGAGCCTTTCACCGAATACG20.13351134846461948No Hit
GCAGATGGTTGGCCGTCATCAGCGCCAGCGTTTTCGGCCCCAGCAGGCGT20.13351134846461948No Hit
GGTAAAGATCATGTAGGAGAAGATCAGCGCAAGTGGCGTGTTGAAGACAC20.13351134846461948No Hit
GTCGAGCCGTGGCTCTCCGCCTGGTCCACGGCGCAGATCGGCGTTCAGCC20.13351134846461948No Hit
TTCTATATCTGTTCCAACAAAATAAGTCTTAGTTAAATTTTCACCAATCA20.13351134846461948No Hit
ATCTTGTGAAGCTTGGCAATTTAAGCTCACCTGTTGTCATTTTGACACTC20.13351134846461948No Hit
CCGTTTGCATCGTGCCGTAGTCAGAGGGACCGAGTGATCCCCTGCCGGCG20.13351134846461948No Hit
TCTGCTGCCCCGCCGCGGGGGCGACGACGGCCAGCGGCGTCTCGCCCCAG20.13351134846461948No Hit
GGATCGCCCGCAGGGATTGTTGTATAGAGATTGCTGGCGTCCATCCTGTG20.13351134846461948No Hit
TAACTACGATGTAACGATTTACGGCATTCGGTCCTCTCTCTGTTGCCTTG20.13351134846461948No Hit
GTGTACCTGCGTACCCAAATCTGCGTGTGCGACGAAGCTCGTGATTTTCT20.13351134846461948No Hit
GATCTCTCATCGCGCACCGAGCAGCAGGCAGCTTCGCTGGCGCAAACGGC20.13351134846461948No Hit
TTCTGATTCGCGATTACTAGCGATTCCGACTTCACGCAGTCGAGTTGCAG20.13351134846461948No Hit
GCGCCTGACTGCCGATGGCATGCTGATCGATGTGCTGGCCCAGGCATTCG20.13351134846461948No Hit
GAAGGGACTTCGGGTCCTGGTGGTCGATCTCGATCCGCAGGGCAACGCCT20.13351134846461948No Hit
ATCGACGAAGTTGTGGCGAAACTCACCGCGACCGACTCGGTCACCGAAGG20.13351134846461948No Hit
CGGTGCCCTTGAAGGTGTGGGTGAGGTGACATTCTCCGTCATCCGAAAGC20.13351134846461948No Hit
CCATTCCCCGGGCCACCTACATTTCGATTATTGCCATGTCGGTGATGTTC20.13351134846461948No Hit
GGCGCGATTGGCCAGCGCCGAGGTGCGGGTCAGTTGCCCGCCTGGCCACG20.13351134846461948No Hit
ACCACGCTCTATTTCATCGCCTTCTTCGTGGTGGTGCAGATTTATGCAGT20.13351134846461948No Hit
GCGCAGGGTGCGGGCGGCCAGGCGAGGGTACGAGACGGTCATGCCCCCGA20.13351134846461948No Hit
GGCTGGAACCGTGGCTGAGTTGGCGCGAAACCGCGTAGCCATAGGCCAGT20.13351134846461948No Hit
GCACGAGCAGGGTTACATCAAGGAAGTGCGGGCCGACGGCAAGGTTTCGC20.13351134846461948No Hit
TGTTGAAGGCCTGGAGCATCTCAAGCAGGCACAGTTGGATGGCAAGGGCG20.13351134846461948No Hit
AATTCATGCTGCTTATCCTCCATATGTTTTACAAGGGTATCAATGGCTTC20.13351134846461948No Hit
GTATTGAGCACGCCGTGCAGGTCGTAGCCGTCTTCGAGCAGTTGGTCCTG20.13351134846461948No Hit
GCGTTGCCGCGCGCAATACTGAATGGGTGTAATGCAATGGTCATCCGACT20.13351134846461948No Hit
GCATGTATACGTTTTGACCAAGTTTTGCTCCTCCTATTCAACAAACAGAT20.13351134846461948No Hit
GTCCTGCCCGGCCTGACCCCGCTGTTCGCCAAGACCTCGGCGGAATCGCA20.13351134846461948No Hit
GGTGTACAGGCTAGGCATACCGCTACTCGGAAATTAAAAGGCAGCGTGCG20.13351134846461948No Hit
GCCGGCCACGGCCAGGAAGGTGGCGGTGTTGTCGGTCACATGCGTGAAGC20.13351134846461948No Hit
CGATTGACGCACTCTTGCGCCACAGCGGCCTGAGTGAGGACGCGGCAGCA20.13351134846461948No Hit
CCATACTGCCCGCAATCATGAAACCGCTCCTGCCGGAAAAAGAGAGCGGT20.13351134846461948No Hit
GGGTCCTTGAGTGCTGCCGCCATGAACGCCTGGGCGTCCTGAGGGTGCTC20.13351134846461948No Hit
GTATATTGACCATCTCAGAGAGAGAATCATGAGTGTCCCACTCGTCTTTT20.13351134846461948No Hit
TTTTAAAGCATAGCAAAACCCAATAGATGTACATCTATTGGGTTGTTTGT20.13351134846461948No Hit
CGCTCTCAGCGCAGTCGGCAATTCGAAGACCCATACCCAGAACGACAACT20.13351134846461948No Hit
CTTCGGGTACGACCAAGATTCAGGTCAGGGTTCAATGCGAAGTCGATATC20.13351134846461948No Hit
TGCTGGATGTGTCCGGTCAGTCGCAGACGGCCGCTGCCGTCGCCCATGGT20.13351134846461948No Hit
GAACCAGCCTCGGCTTCCACCGAGAAGGCAATCTCGAAGACTGCTTGTTT20.13351134846461948No Hit
CACCTGATGGGCGGCCAATTGGCTGAGTTCAAGAAACGGCGAGCCGGGGT20.13351134846461948No Hit
ACGTAGCTTGGGCGCAACCGGATCCATCAACCGGACATAGCTGGCCAGCC20.13351134846461948No Hit
GCCACGTAGTCGGGCTGCCAGCCGCGGCCACGCAGGTATTCCATGGCCTT20.13351134846461948No Hit
GAGAGGTTATGCGCCGAGGGGACGTAGCGCAGAGAACTCTGCGTTCGAGG20.13351134846461948No Hit
CTCTCCAAGCACGAGACCTCGAGCCAGGGCGTCGTGTTCGGCATCTCGGG20.13351134846461948No Hit
ATTCTTTGCTGCCGCGGCGAACGGGCATGGTGACGTATTTCCGCGAGCAG20.13351134846461948No Hit
ATCGTGAACAGCCAGTTGAAGATCTTCACGCCCGTCGGGATCGAGATGAT20.13351134846461948No Hit
GTATACAGCGACGATTGCTTAGGATCATCTGGATAATCCGCGCCTTCAGA20.13351134846461948No Hit
CTCTTCAACGACAGCATCTACTACAACATCGCCTACGGCCGCCCCGATGC20.13351134846461948No Hit
GTCCATCCATTTACGGCAAGGCAAAAGAGCTGGGATTGAAGCGCAGCGCT20.13351134846461948No Hit
GCCCTGATGCTCACCGAGGCGGGCTACCGGCAGCGACGCAGCTCCAAGGA20.13351134846461948No Hit
CTTATGAGGATTCCCGAGCTGTGTTTCTGCCGCGAGATGATATTCGTTCG20.13351134846461948No Hit
GTCCTTATGGTCAGGGCTAAGTGGCTGGTAATGTACACCCGATATGTTGG20.13351134846461948No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)