FastQCFastQC Report
Fri 6 May 2022
H3N72DRX2_n01_141b_KD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3N72DRX2_n01_141b_KD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3556
Sequences flagged as poor quality0
Sequence length101
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTATATTCATACAGTGTTTATTGGCTTGCTTTGGCGTTTCCATGTTTG70.19685039370078738No Hit
CTTGTACATCTGCGCACGGGCCGCCATGGCCTCCTCGACGGTGGCGAACT60.1687289088863892No Hit
CCCCATAACCACCGTTGATTCCCATACCCACATCATCCAACGACCCACTG60.1687289088863892No Hit
GCCAGGGAAATCTACCGTCAGATCACCAATCCCCGGCCCGCACCCGACAA60.1687289088863892No Hit
GACTTTTGCCTATCCGGGCCTGCATACCGGCGTGAGGCCCGGCGTGGAGC60.1687289088863892No Hit
ACAGTCAGTTTTTGTGCGACGTGCAGCTCGGCTACTTTCAGGAAGGCTCG60.1687289088863892No Hit
AAGTAAGCCCGCTGACCAACCTGCTCCGCGCGGTTGCCGTATAGTTGAAC60.1687289088863892No Hit
GTTGTTGTAGGTGCTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGG60.1687289088863892No Hit
GTGGGCACCGGACTTGGCGGCGACGAAGACGCCAGAGAAGACGGCGATTC60.1687289088863892No Hit
CGGTAATACGAACCCGGTGGGACCTGTCCGAATGGACGGGTCCCACCGGC50.140607424071991No Hit
AGCAGTAAGGAAAACATGCTGCTGCTGACACTTCCCAATCCACACCCCCG50.140607424071991No Hit
GTCTTGATGCGGATGTCCTTCACATCGGAAGCCACACGCAGGGCGTTCGT50.140607424071991No Hit
CCCCATACGTGCTGAGCACGTTCCCCTTGCTGGTCCGGGACTGCTCCTGA50.140607424071991No Hit
GCAACCGGCCGTGTGACGACGGCGACGTATTTCTCCTCGGGCATGGACTT50.140607424071991No Hit
CTCTCTCCGGGTGCAAGGATGACCTCGGCCGGGCCCAGGAGCTCGGAGCC50.140607424071991No Hit
AGGGTGCGCCGGACGTAACCTGGGAGCTCCCGCCGGTGCCCTAGCTTAGG50.140607424071991No Hit
TGGCCGGCCTGCTGAACCTGGTTCCCCGCTACCTGCCGCGTTACGGCATG50.140607424071991No Hit
GTCGAGCCCATCGCGCAGGCGCAGCGGCACATTACGTTGCACCCACTCGA50.140607424071991No Hit
ATCCTGTACTTGCGGGGCTGTACCCACTCCGCTTCGCGCCCACAGGCGAC50.140607424071991No Hit
GGCTGGCCGGCCGGATTGGAATGTCCCCCATCCCGTTCTACCTGCTGGGC50.140607424071991No Hit
GCCCTGGCCCGGCACCGGGGCGTCCACGTCGCGGACTTCCAGCACCTCCG50.140607424071991No Hit
GGTCATTCACCTTGGGCTCCGCCCTCGCCATGGCGATTGTTGTTGGGACG50.140607424071991No Hit
CGCAATAGGATCTCGATACCGCCAAAGCGCTCGGCGACCCAGTTGTAGGC50.140607424071991No Hit
CTCCAAAAACGTACCGTCCGCTATGTAGCCTGACTGATGTTGGTCGCTGA50.140607424071991No Hit
TCACCCCGGTGTTCACCGTGGGCACCCAGATCATCGAAGCACTCACCATC40.11248593925759282No Hit
GTTTCCAGTAAGGATCCTGCGACCCGGCGGCATCCGTGACGTAGCACGCG40.11248593925759282No Hit
GGTTGCTCACGGTTCCTGTCCTTTCGCTGCTTTTGCCTGCCGCCCCTTGG40.11248593925759282No Hit
GGACTGCTGAAAGAGGTGGAGCAGGGCCTGGCGATCACCACCCCCCAAGC40.11248593925759282No Hit
GCACCCACGCATGCGCGCCATGCGCACGCGCCACCTGGGCCCAGCGGCGG40.11248593925759282No Hit
AAATGATCTTGGCCGGCACCTGTCCGTTAGTTGCCCCAGGCTGCGTCCAT40.11248593925759282No Hit
TTCGCATACTTACCGCCCGGTAGTTCTGCTACACAGAGATTTAAGAAACG40.11248593925759282No Hit
GAACTCGTCGAGGACGTCGTTCTCGTTCGTCGCGACGACGAGCTGGTCGA40.11248593925759282No Hit
CGCAGCATCATCGGCGCACAGACACTGATCAACCTGGGCATCCCCAACCC40.11248593925759282No Hit
GGCCATGACGCACAGTGCACCCGGTGACGGCACTCCTGCGGGCGAGGTGC40.11248593925759282No Hit
GAAGAAGACAGGGGTGTTGTTGCCCACGAGGTCGTAGTTGCCCTCGGAGG40.11248593925759282No Hit
CAGTACCACCGACCGCGAGCGCTGCGGCGCGGTGCCGCCCGCCCCGGCGG40.11248593925759282No Hit
GGATCTAGCCCGCTGGAAGAGCCCGGCGGGGAGGTGGTTGGCTTCGCGCG40.11248593925759282No Hit
ACTCAACCCGGAACGGGTTCTTGAAGCCGCGCAGCTTCGGCAGGCGCATG40.11248593925759282No Hit
ATGCGAGGTCTTCGGCGATGACCGCCACGAGCTGGGTGGTGAACATGGTG40.11248593925759282No Hit
CCCTCAGTGGCCACCGCTCCCGTGCCGTACTGATGAAGAATCACGGCCCG40.11248593925759282No Hit
GTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGACCAGTGAGC40.11248593925759282No Hit
CAAGACATCTGACGGGGCTCACGCTCAGCGCAGAGATTGCCGGCCACACC40.11248593925759282No Hit
CTTCACCGCACCGGCCGGCAGGGCTGCCTTCGCGCCCGCCGTCAATGCCT40.11248593925759282No Hit
GCCATGGACCCCGCACTTATCGCCTGCCCCGCCTGCGGAAAGACGAACCG40.11248593925759282No Hit
GGCCCAACCAGGACTATCCCGACGATCCGGTCACGGTAGGCGCTGCGTTC40.11248593925759282No Hit
CAGGTAATGGACACCGTCGACCATTCCGCTTCGGAACCGGGCAGCCCGGG40.11248593925759282No Hit
TTTCAAGTTACAATGAAACTGCTAGCAAAATAACTGAATAGATCGAAATC40.11248593925759282No Hit
GCCTTGGTGATGCCCATGAGCTCGGGACGTCCGGAAGCCGGAGTCTTGCC40.11248593925759282No Hit
GCAGCAGCCGCCGGATGGGCCGGACAGCGAGCAACTCCCGGTAGAGAGCG40.11248593925759282No Hit
ATGTGGGCCAGTCCGGACGGCAACAGCGGCGCCGCGGAGCAGGCGATTGC40.11248593925759282No Hit
CGAGCGGTTCCACGCCAGGCGTGTCGGCTCATGGCCGGGCTCGCCAAAGA40.11248593925759282No Hit
TCGGTTTCCTGCGCAAGCTCAAGGGGCAGGCGGACACCTACGAGGTGGCA40.11248593925759282No Hit
GTCTACGGCTGATTCAACTTCCATCGCCGACGCCGGAGCGGAGTCGCGCT40.11248593925759282No Hit
AGCATGGCCAGAAGGGCGCGAAGGAATGGGCGCGTTGCGGTCATGGCGTT40.11248593925759282No Hit
CCATTTGCCCGGGCTGCAGCTTGCCCGTGCGGATCATGTCCAGCATCGGG40.11248593925759282No Hit
CCACCGGTTCCACCACCTCCAGGGTGGTGAGCGTGGACACATCCGAGTCC40.11248593925759282No Hit
CTGGTAGTGCACCAGAACCTGGGCGTGGTTGGCGCGGCCGGTCGATTCGC40.11248593925759282No Hit
GTTCGGCCTCTACATGTTCGGGCGCGACGTGGAGCGCACCGTGGGAGCGC40.11248593925759282No Hit
CCGTCATCGAGTCACCGGCGCCATAAGTTTGTGCCTGTTGGCGGGTCACT40.11248593925759282No Hit
CGAATACACCCACTGGTTCGACTCCATGCTCCCGGGCCTGGACCGCTCCG40.11248593925759282No Hit
CCGAAGGATGCGGCCGTAGCCGGTGGCGTCGTCCAGGATCGCGGTGAGGA40.11248593925759282No Hit
CCGATGAAACAACGGCCGCCCCCGCCCCGCATTCGGAGACCTAAGCATGA40.11248593925759282No Hit
TGCCAGTCGGCGGCAGCGTCCTTGACTCCTGACCGCACCAGGTCCACAAG40.11248593925759282No Hit
TTCCAAGCCCGCCTGGGGCTCCCCACGGCCCACATCGACCAGCTCGAGAC40.11248593925759282No Hit
TAGGAGCGCATCTGGTCGCCCCAGCTCGCCGTGATGGTGCCGGCCAGCTC40.11248593925759282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)