FastQCFastQC Report
Sat 9 Oct 2021
H3KVFAFX3_n02_dad1-9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3KVFAFX3_n02_dad1-9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2640146
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1044163.9549327953832853No Hit
TGTCGACCTTCTAGAGACCAAGGCCATTATCTTCCCCGTTTCTCTTCTTG31610.11972822715107423No Hit
CTAATAAGGCAGGTTCGTATTGTAGGTATATTTAATATAATCAGCAACCA27650.10472905665065493No Hit
TCACAATATGGTCAAATTCCTTGGATTTGGCTTCAAGGGCGTTCTTTAAA27610.10457754987792342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)