FastQCFastQC Report
Sat 9 Oct 2021
H3KVFAFX3_n02_dad1-7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3KVFAFX3_n02_dad1-7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7683752
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG116979815.22430708331034No Hit
GTAAGATGTGCTGCTTAGATTCTTCCTCATATTTTTCCTTCATAGAGGCG205290.267174161789709No Hit
TCACAATATGGTCAAATTCCTTGGATTTGGCTTCAAGGGCGTTCTTTAAA189040.24602563955734127No Hit
TGTCGACCTTCTAGAGACCAAGGCCATTATCTTCCCCGTTTCTCTTCTTG156110.20316897265814932No Hit
TGCTTGTAACGGCCGGCCGTTAAATGGGCCTTCGGGGTCCAAACGAGGCG112890.1469204107576611No Hit
TCAATGTCAATTTCCGCAATACCACCGATCAATAGTTCTAGTTCACGCTC112040.145814180363968No Hit
CTAATAAGGCAGGTTCGTATTGTAGGTATATTTAATATAATCAGCAACCA111510.14512441317731234No Hit
AAATAATGCATATAACCGTATCTTTTTTATATGAACCTAGTTTTGCTGTA91560.11916053511357473No Hit
GACATCGAACTACATCCTGAGCAACCGAGAAATGTCCTTTCAAAAGCTGT84840.11041480776578941No Hit
TTCTAAAGTGTTTCTGGTAAAGCAGGCAGTAATATTTTGATTAGCCAGCT84710.11024561958793049No Hit
CCGCAACACCTTCGTGATAAAAATCGTTAAGTTCAACGAGGCTAACAACG77220.10049777764821145No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)