H3KMLBGXC_n01_0801-8G-GBF2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KMLBGXC_n01_0801-8G-GBF2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15568783
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	258263	1.658851562129166	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAATCGATCTCGTATGC	154982	0.9954663765305226	TruSeq Adapter, Index 3 (97% over 36bp)
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	76708	0.4927038934257096	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	39858	0.25601230359495664	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	36607	0.23513077419089215	No Hit
CTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAG	36225	0.23267714631259231	No Hit
CCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTA	32305	0.20749855656668864	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29116	0.18701525995962562	No Hit
TTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGA	24684	0.15854803808364468	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	22772	0.14626705247288757	No Hit
TCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGA	20076	0.1289503489129497	No Hit
GTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTAT	18798	0.12074161480701477	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	18532	0.11903306764568561	No Hit
AAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAA	18418	0.1183008331479731	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	18172	0.11672074817922506	No Hit
GAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCCTGATA	18152	0.11659228598664391	No Hit
GAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCCTGATAGT	17814	0.11442127493202263	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	21115	63.88282	45
CGTATGC	21325	63.483505	44
TATGCCG	21335	63.224083	46
GCACACG	22085	62.72658	11
ACGTCTG	22650	61.192974	15
TCGTATG	21990	60.942966	43
CTCGTAT	20365	60.64999	42
CACACGT	22860	60.554676	12
ACACGTC	23125	59.921482	13
AGCACAC	23150	59.916096	10
CACGTCT	23200	59.817905	14
ATGCCGT	23140	58.352886	47
GCCGTCT	23035	57.995914	49
CTAATCG	23730	57.477272	33
TCCAGTC	23960	57.2909	25
CAGTCAC	23870	57.213657	27
CCAGTCA	23945	57.04907	26
AGTCACT	23980	56.9658	28
GAGCACA	24550	56.527805	9
GTCACTA	24390	56.008198	29