H3KMLBGXC_n01_0801-2R-DIV2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KMLBGXC_n01_0801-2R-DIV2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16191551
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	142838	0.8821761423596789	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	55689	0.3439386381205852	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	31259	0.19305747794019237	No Hit
CTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAG	21387	0.13208740780917158	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	21001	0.12970344842195786	No Hit
CCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTA	16351	0.10098476668479751	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACTCTA	24415	49.776405	4
GTACTCT	24630	49.256626	3
TCTAGTT	27645	43.780373	7
CGTACGT	3085	43.11146	34
ACTCTAG	30330	42.123295	5
TTGTACT	29165	41.454113	1
GTACGTA	3260	40.797195	35
TGTACTC	29725	40.790268	2
CGTATGC	3145	40.063004	46
CCGTACG	3390	39.542435	33
CTCTAGT	32050	39.393692	6
GTATGCC	3250	39.091736	47
TATGCCG	3400	37.778854	48
TACGTAA	3520	37.08775	36
TAGTTGT	35890	33.372467	9
GCACACG	3995	33.205257	11
ATGCCGT	3940	32.601044	49
CTAGTTG	36935	32.504074	8
CTCGTAT	3745	31.401407	44
TCGTATG	3965	31.247963	45