H3KCTBGX7_n01_nlp7_36.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_36.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12721198
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGATCCAATCTCGTAT	27775	0.21833635479928856	TruSeq Adapter, Index 19 (97% over 37bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	24572	0.1931579085554678	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24448	0.1921831575925475	No Hit
CTGGAGTACAACTACAACAGCCACAACGTCTATATCATGGCCGACAAGCA	18040	0.14181054331518148	No Hit
CGGCAACATCCTGGGGCACAAGCTGGAGTACAACTACAACAGCCACAACG	15894	0.1249410629407702	No Hit
GGCAGACGTGCCCTCGGCCAGAAGGCTTGGGGCGCAACTTGCGTTCAAAG	14966	0.11764615250859235	No Hit
GGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGG	14658	0.11522499689101608	No Hit
CTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGT	13920	0.10942365648266776	No Hit
CTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTG	13827	0.10869259326047752	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	4530	52.61483	48
CGTATGC	4955	48.455124	46
GTATGCC	5000	47.94922	47
TCGTATG	5670	42.221367	45
CTCGTAT	5205	41.353794	44
ACGTGAT	6255	38.94375	32
AGTCACG	6250	38.86337	28
GTCACGT	6245	38.83844	29
GCCGTCT	6520	36.82426	51
TCACGTG	6615	36.665924	30
CACGTGA	6645	36.447723	31
CAGTCAC	7140	34.16624	27
ACGTCTG	7275	33.8686	15
GCACACG	7550	32.54252	11
GGCAGAC	4005	32.516117	1
TCTCGTA	6595	32.26647	43
TACTCTA	6850	31.32509	4
CACGTCT	7915	31.130257	14
CACACGT	7905	31.036692	12
CCTACTA	6325	30.82139	34