H3KCTBGX7_n01_nlp7_34.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_34.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12004188
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24661	0.2054366359473877	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTAGCTATCTCGTATGC	23987	0.19982192881351077	TruSeq Adapter, Index 3 (97% over 37bp)
CTGGAGTACAACTACAACAGCCACAACGTCTATATCATGGCCGACAAGCA	21669	0.18051200131154227	No Hit
CGGCAACATCCTGGGGCACAAGCTGGAGTACAACTACAACAGCCACAACG	19982	0.1664585726248206	No Hit
GGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGG	17878	0.14893135628998813	No Hit
CTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGT	16348	0.13618580448756717	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	16068	0.13385328520346398	No Hit
CGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGAT	13443	0.11198591691499665	No Hit
CGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTGGCGGATCTTGAAGTTC	13233	0.11023652745191928	No Hit
GCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAA	12332	0.10273081361271584	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	3665	48.797924	46
CGTATGC	3920	45.89161	44
GTATGCC	4130	43.72744	45
CACCTAG	4475	40.35644	31
TCGTATG	4625	38.820724	43
CTCGTAT	4545	37.96392	42
ACCTAGC	4785	37.74176	32
TAGCTAT	5180	34.25582	35
TCACCTA	5295	34.238914	30
GCCGTCT	5550	32.602848	49
CCTAGCT	5755	31.745312	33
GTCACCT	5825	31.003447	29
GCTATCT	5565	30.628222	37
ACGTCTG	6215	29.677881	15
TCTCGTA	5805	29.241478	41
AGTCACC	6335	28.7285	28
GCACACG	6440	28.477724	11
TACTCTA	5195	28.301088	4
TATCTCG	6040	28.161718	39
CACACGT	6530	27.978146	12