H3KCTBGX7_n01_nlp7_29.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_29.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10345783
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	105729	1.0219526158629078	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGGCGATCTCGTATGC	30741	0.29713555755035653	TruSeq Adapter, Index 7 (97% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25266	0.24421544507554432	No Hit
TGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTG	14981	0.1448029598146414	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	13602	0.1314738575127663	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	12986	0.12551974074847694	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	12768	0.12341260202345244	No Hit
GTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTAT	11964	0.11564131975317865	No Hit
GTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTATCAG	11751	0.11358250989799419	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	5140	51.20523	46
CGTATGC	5380	49.18096	44
GTATGCC	5605	46.956932	45
CTCGTAT	5185	46.913033	42
TCGTATG	5770	45.31086	43
TACTCTA	19550	44.655655	4
GTACTCT	19990	43.69004	3
TCTAGTT	20065	43.539757	7
TTGTACT	20250	42.78459	1
ACTCTAG	20960	42.219856	5
CCAGGCG	6425	41.781086	33
CTCTAGT	21090	41.594254	6
TGTACTC	20985	41.567837	2
CAGGCGA	6305	41.466084	34
CTAGTTG	22020	39.13336	8
ACCAGGC	6890	38.80893	32
ATGCCGT	6905	38.01574	47
TAGTTGT	22920	37.963207	9
GCCGTCT	6920	37.781605	49
ACGTCTG	7440	36.739697	15