H3KCTBGX7_n01_nlp7_25.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_25.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10518769
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	124411	1.182752468468506	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAAAAGATCTCGTATGC	59933	0.5697719951830865	TruSeq Adapter, Index 7 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26162	0.24871731663657604	No Hit
TGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTG	18931	0.17997353112327116	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	15275	0.1452166123241227	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	12805	0.1217347771397965	No Hit
GTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTATCAG	11029	0.10485067216515545	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	8705	58.298462	46
CGTATGC	8855	57.11329	44
GTATGCC	8905	57.067726	45
CTCGTAT	8820	54.99845	42
TCGTATG	9555	52.746017	43
GCCGTCT	10590	47.624226	49
ATGCCGT	10670	47.46397	47
CAGTCAC	10975	46.336266	27
TCTCGTA	10365	46.22661	41
ACGTCTG	11425	45.675728	15
TACTCTA	22020	45.67118	4
TTGTACT	22075	44.974525	1
GTACTCT	22450	44.827595	3
TCTAGTT	22515	44.817226	7
AGTCACC	11360	44.611843	28
CACGTCT	11795	44.242916	14
ACTCTAG	23265	43.76921	5
ACACGTC	11950	43.75671	13
CCAGTCA	11690	43.7417	26
TCCAGTC	11855	43.63478	25