H3KCTBGX7_n01_nlp7_15.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_15.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8419932
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	50284	0.5972019726525107	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	49515	0.5880688822665076	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	24748	0.2939216136187323	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGA	23330	0.2770806225038397	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAG	20630	0.24501385521878324	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCATCTCGTATGC	17992	0.2136834359232355	TruSeq Adapter, Index 16 (98% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17292	0.20536982959007272	No Hit
GCTTGATGTCGGTCTTGTAGGCGCCGGGCAGCTGCACGGGCTTCTTGGCC	15939	0.1893008162061166	No Hit
TGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGAGTTCA	12385	0.14709144919460157	No Hit
CGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTC	12100	0.14370662375895674	No Hit
TGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTCCTCCCTG	11077	0.1315568819320631	No Hit
CGGCCCTCGGCGCGCTCGTACTGTTCCACGATGGTGTAGTCCTCGTTGTG	9330	0.11080849584058398	No Hit
CCGTGACCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTG	9327	0.11077286609915615	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	9053	0.1075186830487467	No Hit
GGGAAGTTGGTGCCGCGCAGCTTCACCTTGTAGATGAACTCGCCGTCCTG	8488	0.10080841507983675	No Hit
TCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	8431	0.10013144999270777	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	2915	48.14659	44
TATGCCG	2960	47.53287	46
GTATGCC	2975	47.410854	45
TACTCTA	9865	43.219223	4
TCTAGTT	10060	42.654778	7
ATGCCGT	3295	42.488308	47
GTACTCT	9935	42.42144	3
CTCGTAT	3045	41.838528	42
TCGTATG	3425	41.18194	43
TTGTACT	10180	40.920547	1
CCCGTCC	3550	40.323174	33
TGTACTC	10915	38.48413	2
TAGTTGT	11095	38.043663	9
ACTCTAG	13240	37.93942	5
CTCTAGT	11505	37.088894	6
GCCGTCT	3845	36.319416	49
CTAGTTG	11700	36.22623	8
CCTACTA	11395	35.045403	34
GTTACCT	11975	34.692654	14
TGTTACC	11995	34.635014	13