H35K7BGXB_n02_MT_4340.TR2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H35K7BGXB_n02_MT_4340.TR2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23932957
Sequences flagged as poor quality	0
Sequence length	151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	120187	0.5021819911346517	No Hit
CGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCCG	106424	0.4446755158587382	No Hit
CGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCCG	68036	0.2842774505465413	No Hit
CCGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCC	63829	0.26669917971272833	No Hit
CTGGGTTAGAACCTCAAAGACACCAGGGTGGTATTTCAAGGACGGCTCCA	46174	0.19293061028773	No Hit
CACACGTGCTACAATGGCGTATACAGAGGGAAGCGAGAGTGCGAGCTGGA	42626	0.17810586464514186	No Hit
GCTACACACGTGCTACAATGGCGTATACAGAGGGAAGCGAGAGTGCGAGC	36935	0.15432693920772098	No Hit
CTACACACGTGCTACAATGGCGTATACAGAGGGAAGCGAGAGTGCGAGCT	31428	0.13131682808772857	No Hit
GCCCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATT	27140	0.1134001118206998	No Hit
CTGGGCTACACACGTACTACAATGGGAGTTAATAGACGGAAGCAATACCG	24066	0.10055589871322627	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGGGAA	65715	50.34571	1
CATTGTA	43130	42.942894	145
CCATTGT	61325	41.70785	145
TGGGCTA	16220	41.00737	2
AACGTAT	94935	37.385246	6
ACGTATT	97710	36.62088	7
GAACGTA	99580	35.830868	5
GGGAACG	98930	35.23458	3
CGGGAAC	96795	34.859688	2
TATTCAC	100255	34.228184	9
GGAACGT	103250	33.49965	4
AGATTAT	28205	33.16756	145
AGTGTAT	9245	32.396122	145
GGTTAGA	28225	32.374306	4
CGTATTC	110720	32.22779	8
GTATTCA	112290	31.959019	9
CTGGGCT	22300	31.317936	1
GAACCTC	28500	26.906322	9
GGGTTAG	32755	26.886683	3
CGAGCAA	10845	26.771551	5