H35K7BGXB_n01_MT_8404.TR2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H35K7BGXB_n01_MT_8404.TR2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21596511
Sequences flagged as poor quality	0
Sequence length	151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGAACGTATTCACCGCGGCGTGCTGATCCGCGATTACTAGCGATTCCG	89169	0.4128861370246333	No Hit
CCGGGAACGTATTCACCGCGGCGTGCTGATCCGCGATTACTAGCGATTCC	74644	0.34562990290422374	No Hit
CCGGGTTAGAGTGGCCATAACACAAGGGTAGTATCCCAACAACGCCTCCA	40445	0.18727562058519545	No Hit
CCGGGTTAGAGTGGCCATAACACAAGGGTAGTATCCCAACAACGTCTCCT	38701	0.17920024211318208	No Hit
CGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCCG	27919	0.1292755112156774	No Hit
CCGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCC	25896	0.11990825740324444	No Hit
GCAGGTTACCCGCGACAGGACGGAAAGACCCCATGGAGCTTTACTGCAGT	24764	0.11466667000053853	No Hit
CTGGGTTAGAGTAGCCATAACACAAGGGTAGTATCCCAACAACGCCTCAC	23049	0.10672557247788776	No Hit
CGGAAAGACCCCATGGAGCTTTACTGCAGTTTGATATTGAGTGTCTGTGC	22161	0.10261379720085341	No Hit
CGGAAAGACCCCATGGAGCTTTACTGCAGTTTGATATTGAGTGTCTGTAC	21940	0.10159048375915906	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTTA	26905	48.016315	2
GTTAGAG	37730	43.560608	5
TTAGAGT	38305	43.247593	6
GGTTAGA	44160	41.65005	4
CATTGTA	34890	41.63924	145
CCGGGAA	47790	38.652405	1
CCGGGTT	34465	38.030693	1
TAGAGTG	39475	34.34319	7
GGGTTAG	55905	32.977203	3
CGGGAAC	65870	32.291378	1
GAGTGGC	41840	32.15914	9
AACGTAT	69055	31.968431	5
GGGAACG	69600	31.17537	2
CCATTGT	51880	30.965342	145
GAACGTA	73800	30.305605	4
TATTCAC	73680	30.098719	9
ACGTATT	73675	30.032784	6
TTTCCGT	32775	29.661434	145
GGAACGT	73770	29.383907	3
TGGGCTA	37980	27.982927	2