H35K7BGXB_n01_MT_7784.TR1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H35K7BGXB_n01_MT_7784.TR1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19885735
Sequences flagged as poor quality	0
Sequence length	151
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	36281	0.1824473674219233	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTC	34822	0.17511044977718954	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	24348	0.12243952763123916	No Hit
CCGCTACGGACCTCCACCAGAGTTTCCTCTGGCTTCGCCCTGCCCAGGCA	22512	0.1132067786279964	No Hit
CTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGC	22435	0.11281956638766431	No Hit
CCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTAC	22396	0.11262344590230132	No Hit
CCGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCC	21707	0.10915865066088831	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	21704	0.10914356446970655	No Hit
CGGGAACGTATTCACCGCAGTATGCTGACCTGCGATTACTAGCGATTCCG	20583	0.10350635769811878	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCTATG	13450	36.759384	145
GAAACTA	12160	36.189724	4
GTCGAAT	6860	35.72039	1
GATCCTG	7440	34.982746	5
AACGTAT	41175	32.750027	5
GATCATG	4320	32.2218	5
AAGAAAC	13660	32.002724	2
GTATTCA	42790	31.39465	8
TCCCTGA	11100	31.088825	3
TCGATCT	2630	30.597612	3
TTGAACG	7365	30.317995	7
GAGCACC	11140	30.195272	145
GAACGTA	46075	30.179596	4
TATTCAC	45650	29.554655	9
AGAAACT	14985	29.172989	3
CGGGAAC	36365	28.508612	1
CGTATTC	47610	28.201052	7
ACGTATT	48540	28.064842	6
CCTCCCT	12900	27.875044	1
CTAACCA	15580	27.454092	8