Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content H35CCBGXL_n01_FebB2_1 H35CCBGXL_n01_FebB2_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 5838772.0 0.0 76.0 44.0 35.661231863584106 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_10 H35CCBGXL_n01_FebB2_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 6073663.0 0.0 76.0 43.0 62.69434271385942 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_11 H35CCBGXL_n01_FebB2_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 8405061.0 0.0 76.0 43.0 64.72077421063189 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_12 H35CCBGXL_n01_FebB2_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 6136583.0 0.0 76.0 43.0 61.693824806262754 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_13 H35CCBGXL_n01_FebB2_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 11617786.0 0.0 76.0 43.0 69.2424030396518 76.0 pass pass pass pass fail warn pass pass warn warn warn H35CCBGXL_n01_FebB2_14 H35CCBGXL_n01_FebB2_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 11137417.0 0.0 76.0 44.0 46.60181568375423 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_15 H35CCBGXL_n01_FebB2_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 5614279.0 0.0 76.0 45.0 44.88827879225196 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_16 H35CCBGXL_n01_FebB2_16.fastq.gz Conventional base calls Sanger / Illumina 1.9 7436512.0 0.0 76.0 44.0 47.55894796191037 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_17 H35CCBGXL_n01_FebB2_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 6407179.0 0.0 76.0 45.0 36.5408856275366 76.0 pass pass pass pass fail fail pass pass fail warn pass H35CCBGXL_n01_FebB2_18 H35CCBGXL_n01_FebB2_18.fastq.gz Conventional base calls Sanger / Illumina 1.9 6566533.0 0.0 76.0 44.0 35.63950158293707 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_19 H35CCBGXL_n01_FebB2_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 7638976.0 0.0 76.0 43.0 60.9889135733823 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_2 H35CCBGXL_n01_FebB2_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7657969.0 0.0 76.0 47.0 23.932043569310686 76.0 pass pass pass pass fail warn pass pass fail warn warn H35CCBGXL_n01_FebB2_20 H35CCBGXL_n01_FebB2_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 10230275.0 0.0 76.0 44.0 28.7881514418513 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_21 H35CCBGXL_n01_FebB2_21.fastq.gz Conventional base calls Sanger / Illumina 1.9 4451047.0 0.0 76.0 44.0 22.725894919977378 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_22 H35CCBGXL_n01_FebB2_22.fastq.gz Conventional base calls Sanger / Illumina 1.9 5798624.0 0.0 76.0 45.0 37.06838956830519 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_23 H35CCBGXL_n01_FebB2_23.fastq.gz Conventional base calls Sanger / Illumina 1.9 5851565.0 0.0 76.0 44.0 34.684779259269924 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_24 H35CCBGXL_n01_FebB2_24.fastq.gz Conventional base calls Sanger / Illumina 1.9 6644025.0 0.0 76.0 46.0 46.353990786879265 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_3 H35CCBGXL_n01_FebB2_3.fastq.gz Conventional base calls Sanger / Illumina 1.9 6424125.0 0.0 76.0 44.0 37.457770832304064 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_4 H35CCBGXL_n01_FebB2_4.fastq.gz Conventional base calls Sanger / Illumina 1.9 7982903.0 0.0 76.0 44.0 55.57670050712191 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_5 H35CCBGXL_n01_FebB2_5.fastq.gz Conventional base calls Sanger / Illumina 1.9 6924723.0 0.0 76.0 43.0 53.41975155262407 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_6 H35CCBGXL_n01_FebB2_6.fastq.gz Conventional base calls Sanger / Illumina 1.9 7007126.0 0.0 76.0 44.0 35.604472346317436 76.0 pass pass pass pass fail fail pass pass fail warn pass H35CCBGXL_n01_FebB2_7 H35CCBGXL_n01_FebB2_7.fastq.gz Conventional base calls Sanger / Illumina 1.9 6224777.0 0.0 76.0 44.0 33.160004576049964 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB2_8 H35CCBGXL_n01_FebB2_8.fastq.gz Conventional base calls Sanger / Illumina 1.9 8640899.0 0.0 76.0 44.0 61.018703772883306 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB2_9 H35CCBGXL_n01_FebB2_9.fastq.gz Conventional base calls Sanger / Illumina 1.9 6994185.0 0.0 76.0 44.0 42.79090494333751 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB3_1 H35CCBGXL_n01_FebB3_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7028915.0 0.0 76.0 43.0 68.98339378571546 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_10 H35CCBGXL_n01_FebB3_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 7355530.0 0.0 76.0 43.0 69.2254616632258 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_11 H35CCBGXL_n01_FebB3_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 7999042.0 0.0 76.0 42.0 73.47618827465601 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_12 H35CCBGXL_n01_FebB3_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 6424341.0 0.0 76.0 45.0 52.03130296827923 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_13 H35CCBGXL_n01_FebB3_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 8339230.0 0.0 76.0 45.0 24.862802575643418 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB3_14 H35CCBGXL_n01_FebB3_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 6905152.0 0.0 76.0 45.0 66.27537096898766 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_15 H35CCBGXL_n01_FebB3_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 6241074.0 0.0 76.0 44.0 70.13416873962048 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_16 H35CCBGXL_n01_FebB3_16.fastq.gz Conventional base calls Sanger / Illumina 1.9 6646633.0 0.0 76.0 43.0 70.76335029979445 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_17 H35CCBGXL_n01_FebB3_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 6775162.0 0.0 76.0 43.0 66.80188564107148 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_18 H35CCBGXL_n01_FebB3_18.fastq.gz Conventional base calls Sanger / Illumina 1.9 6370226.0 0.0 76.0 44.0 52.96327258630025 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB3_19 H35CCBGXL_n01_FebB3_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 6833229.0 0.0 76.0 44.0 66.51196840120647 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_2 H35CCBGXL_n01_FebB3_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7960965.0 0.0 76.0 43.0 70.57278573791315 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_20 H35CCBGXL_n01_FebB3_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 6518263.0 0.0 76.0 43.0 52.65620609035082 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB3_21 H35CCBGXL_n01_FebB3_21.fastq.gz Conventional base calls Sanger / Illumina 1.9 5864229.0 0.0 76.0 44.0 56.85085693694156 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_22 H35CCBGXL_n01_FebB3_22.fastq.gz Conventional base calls Sanger / Illumina 1.9 6607582.0 0.0 76.0 42.0 72.86860235017339 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_23 H35CCBGXL_n01_FebB3_23.fastq.gz Conventional base calls Sanger / Illumina 1.9 4027340.0 0.0 76.0 46.0 34.27379752517623 76.0 pass pass pass pass fail warn pass pass fail fail fail H35CCBGXL_n01_FebB3_24 H35CCBGXL_n01_FebB3_24.fastq.gz Conventional base calls Sanger / Illumina 1.9 4733581.0 0.0 76.0 44.0 38.01131269768689 76.0 pass pass pass pass fail warn pass pass fail warn pass H35CCBGXL_n01_FebB3_3 H35CCBGXL_n01_FebB3_3.fastq.gz Conventional base calls Sanger / Illumina 1.9 6308611.0 0.0 76.0 45.0 58.20113980915216 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_4 H35CCBGXL_n01_FebB3_4.fastq.gz Conventional base calls Sanger / Illumina 1.9 7580927.0 0.0 76.0 44.0 67.83950956499615 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_5 H35CCBGXL_n01_FebB3_5.fastq.gz Conventional base calls Sanger / Illumina 1.9 6868754.0 0.0 76.0 44.0 56.226922524777315 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_6 H35CCBGXL_n01_FebB3_6.fastq.gz Conventional base calls Sanger / Illumina 1.9 6618189.0 0.0 76.0 43.0 70.57562176227623 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB3_7 H35CCBGXL_n01_FebB3_7.fastq.gz Conventional base calls Sanger / Illumina 1.9 2488378.0 0.0 76.0 45.0 18.424467229215118 76.0 pass pass pass pass fail pass pass pass fail warn pass H35CCBGXL_n01_FebB3_8 H35CCBGXL_n01_FebB3_8.fastq.gz Conventional base calls Sanger / Illumina 1.9 11376076.0 0.0 76.0 45.0 51.290032535821105 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB3_9 H35CCBGXL_n01_FebB3_9.fastq.gz Conventional base calls Sanger / Illumina 1.9 7600914.0 0.0 76.0 44.0 67.62088289519521 76.0 pass pass pass pass fail warn pass pass warn warn pass H35CCBGXL_n01_FebB4_1 H35CCBGXL_n01_FebB4_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7415486.0 0.0 76.0 37.0 74.03402386792419 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB4_10 H35CCBGXL_n01_FebB4_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 6691728.0 0.0 76.0 39.0 72.24312862914512 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_11 H35CCBGXL_n01_FebB4_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 8073541.0 0.0 76.0 41.0 63.68121583562779 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_12 H35CCBGXL_n01_FebB4_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 7330397.0 0.0 76.0 40.0 72.02440019806053 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_13 H35CCBGXL_n01_FebB4_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 6784513.0 0.0 76.0 41.0 69.85110170849165 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_14 H35CCBGXL_n01_FebB4_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 6052719.0 0.0 76.0 41.0 68.05245716346596 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_15 H35CCBGXL_n01_FebB4_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 6659665.0 0.0 76.0 39.0 78.70449593470235 76.0 pass pass pass pass fail warn pass pass pass pass pass H35CCBGXL_n01_FebB4_16 H35CCBGXL_n01_FebB4_16.fastq.gz Conventional base calls Sanger / Illumina 1.9 6376479.0 0.0 76.0 41.0 66.17702289522857 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_17 H35CCBGXL_n01_FebB4_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 6711634.0 0.0 76.0 40.0 72.6769306952854 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_18 H35CCBGXL_n01_FebB4_18.fastq.gz Conventional base calls Sanger / Illumina 1.9 6814098.0 0.0 76.0 39.0 73.2252369670816 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_19 H35CCBGXL_n01_FebB4_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 6910297.0 0.0 76.0 40.0 67.66744087434962 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_2 H35CCBGXL_n01_FebB4_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 6774023.0 0.0 76.0 40.0 75.78002495079933 76.0 pass pass pass pass fail warn pass pass pass pass pass H35CCBGXL_n01_FebB4_20 H35CCBGXL_n01_FebB4_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 6114075.0 0.0 76.0 40.0 69.06895789739052 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_21 H35CCBGXL_n01_FebB4_21.fastq.gz Conventional base calls Sanger / Illumina 1.9 6622920.0 0.0 76.0 40.0 70.84416761010128 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_3 H35CCBGXL_n01_FebB4_3.fastq.gz Conventional base calls Sanger / Illumina 1.9 6357702.0 0.0 76.0 41.0 66.1009047811316 76.0 pass pass pass pass fail fail pass pass warn warn pass H35CCBGXL_n01_FebB4_4 H35CCBGXL_n01_FebB4_4.fastq.gz Conventional base calls Sanger / Illumina 1.9 6323521.0 0.0 76.0 39.0 77.12722658796505 76.0 pass pass pass pass fail pass pass pass pass pass pass H35CCBGXL_n01_FebB4_5 H35CCBGXL_n01_FebB4_5.fastq.gz Conventional base calls Sanger / Illumina 1.9 6303228.0 0.0 76.0 38.0 80.43311403963229 76.0 pass pass pass pass fail pass pass pass pass pass pass H35CCBGXL_n01_FebB4_6 H35CCBGXL_n01_FebB4_6.fastq.gz Conventional base calls Sanger / Illumina 1.9 5902994.0 0.0 76.0 39.0 75.34515780627373 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_FebB4_7 H35CCBGXL_n01_FebB4_7.fastq.gz Conventional base calls Sanger / Illumina 1.9 6470499.0 0.0 76.0 39.0 79.51893045139411 76.0 pass pass pass pass fail warn pass pass pass warn pass H35CCBGXL_n01_FebB4_8 H35CCBGXL_n01_FebB4_8.fastq.gz Conventional base calls Sanger / Illumina 1.9 6260822.0 0.0 76.0 38.0 80.98323862584792 76.0 pass pass pass pass fail pass pass pass pass pass pass H35CCBGXL_n01_FebB4_9 H35CCBGXL_n01_FebB4_9.fastq.gz Conventional base calls Sanger / Illumina 1.9 6944397.0 0.0 76.0 40.0 73.11266732590337 76.0 pass pass pass pass fail fail pass pass pass warn pass H35CCBGXL_n01_undetermined H35CCBGXL_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 82689442.0 0.0 76.0 44.0 12.935102891509967 76.0 pass pass warn pass warn warn pass pass fail pass pass