FastQCFastQC Report
Mon 7 Feb 2022
H355YBGXL_n01_C2_Zmm16_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH355YBGXL_n01_C2_Zmm16_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30183677
Sequences flagged as poor quality0
Sequence length76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC532180.1763138400931073TruSeq Adapter, Index 2 (100% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)