H33HLBGXB_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H33HLBGXB_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30171810
Sequences flagged as poor quality	0
Sequence length	49
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1315157	4.358893284824477	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	132548	0.43931073409251886	No Hit
TTCTAGCTCTAAAACCGCCGTTAAGCGGAAACGATCCCCATATAAGAAA	90663	0.30048909893042547	No Hit
GCATAGCTCTTAAACTTGAACGGGCCGCGGAAGCGCCCCATATAAGAAA	73603	0.2439462531415914	No Hit
GCATAGCTCTTAAACCTTGTCCTTGAACTCTATTCCCCCATATAAGAAA	71090	0.23561728646706975	No Hit
GCATAGCTCTTAAACCTGTCTATGGAGACTTTAGCCCCCATATAAGAAA	61194	0.202818458687099	No Hit
TTCTAGCTCTAAAACCATATAGGTCCTTGGGAACCCCCCATATAAGAAA	59717	0.19792316072519348	No Hit
GCATAGCTCTTAAACCGCCGTTAAGCGGAAACGATCCCCATATAAGAAA	48748	0.16156803320715596	No Hit
TTCTAGCTCTAAAACCGGTGAACAGCTCCTCGCCCCCCATATAAGAAAC	31549	0.10456449248487246	No Hit
TTCTAGCTCTAAAACCGGTGAACAGCTCCTCGCCCCCCATATAAGAAAA	31017	0.10280125720001551	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCATAGC	59290	42.282978	1
ATAGCTC	63150	42.019634	3
TAGCTCT	102380	42.016422	4
AACCGGT	17560	41.849125	13
TTCTAGC	38580	41.722256	1
CATAGCT	60415	41.679714	2
CTAGCTC	39870	41.672237	3
GCCGTTA	18265	41.562576	17
ACGATCC	18435	41.258953	31
TCTAGCT	39955	41.125523	2
TGTCCGA	15900	41.120472	13
ACCGGTG	17900	41.054768	14
CCGTTAA	18475	41.021954	18
GTCCGAC	16050	40.85727	14
AACGATC	18720	40.76849	30
CGACAAT	16375	40.6222	17
GTTAAGC	18825	40.533302	20
CGATCCC	18940	40.340137	32
CCGACAA	17115	40.247402	16
TTGTCCG	16400	40.20732	12