Basic Statistics
Measure | Value |
---|---|
Filename | H33HLBGXB_n02_5P_R-BLG.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16478562 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 369335 | 2.2413060071625184 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 285655 | 0.0 | 42.6312 | 11 |
TGTCCTA | 224775 | 0.0 | 42.591164 | 11 |
CAACGCT | 285725 | 0.0 | 42.587646 | 12 |
AACGCTT | 286055 | 0.0 | 42.5572 | 13 |
GTCCTAC | 224805 | 0.0 | 42.551044 | 12 |
TCCTACC | 224055 | 0.0 | 42.53867 | 13 |
ATGTCCT | 55600 | 0.0 | 42.502544 | 10 |
TTGTCCG | 541630 | 0.0 | 42.481895 | 12 |
GTCTTTG | 476220 | 0.0 | 42.480503 | 11 |
TGTCCGA | 541235 | 0.0 | 42.47779 | 13 |
GTCAACG | 134325 | 0.0 | 42.471577 | 10 |
CTCAACG | 73895 | 0.0 | 42.46893 | 10 |
AGTCTTT | 146460 | 0.0 | 42.46703 | 10 |
TCCGACA | 541950 | 0.0 | 42.458496 | 15 |
GTCCGAC | 541355 | 0.0 | 42.448765 | 14 |
CGTCTTT | 90570 | 0.0 | 42.44589 | 10 |
CGCTTGG | 285830 | 0.0 | 42.428112 | 15 |
CTGTCCT | 59125 | 0.0 | 42.3941 | 10 |
CCGACAA | 542810 | 0.0 | 42.391705 | 16 |
TCTTTGT | 477045 | 0.0 | 42.379547 | 12 |