FastQCFastQC Report
Sat 9 Mar 2019
H33HLBGXB_n01_5P_G-HTO.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33HLBGXB_n01_5P_G-HTO.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9794472
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGCATC158650.019.2705421
GACTGGG157900.019.1961259
AGACTGG159400.019.0279338
ACTGGGT161550.018.75003410
GACTTCT103700.018.6980152
GCATCAG152750.018.6708773
ACTTCTC105200.018.4028913
TCTCTGG103750.018.3236796
ATCAGAC154800.018.2175565
GGCATCA156900.018.170662
CAGACTG164500.018.1098297
CCCATAC23800.017.942771
GTGATAT57300.017.818910
CCCATAG9200.017.7172473
TCAGACT164600.017.7164346
TATGCCC28850.017.7138791
CGACTTC123800.017.6752381
TGACGGC37200.017.6359751
ACCCACT38350.017.5243741
ACTGAAC32650.017.4900681
Produced by FastQC (version 0.11.5)