FastQCFastQC Report
Sat 9 Mar 2019
H33HLBGXB_n01_5P_G-BLG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33HLBGXB_n01_5P_G-BLG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20035317
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAAG569400.019.47058710
AGAGGGA675600.019.4663878
CAGAGGG672850.019.4611327
TATAAGC253050.019.42776311
TATCCAG678900.019.3735983
GAAGGCA572950.019.2595843
AGGGATA682200.019.25337810
CAGTATA577800.019.1924788
TATAAGT198000.019.16742911
GGCAGTA570150.019.1431886
TTATCCA687350.019.1194232
GCAGTAT576050.019.1031277
GAGGGAT688900.019.0878059
AGTATAA583200.019.0303449
ATCCAGA686600.019.0195674
TGAAGGC579550.019.0091952
TATAAGG94450.019.00552211
GGGATAT223250.018.98843811
ATTATCC734700.018.9543511
GTGAAGG610200.018.8784521
Produced by FastQC (version 0.11.5)