FastQCFastQC Report
Tue 16 May 2023
H33GJBGXT_n01_R24_h14rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33GJBGXT_n01_R24_h14rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA8015.151515151515152No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA6712.68939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC5710.795454545454545No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC5710.795454545454545No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT5310.037878787878787No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT499.280303030303031No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC468.712121212121213No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG91.7045454545454544No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT91.7045454545454544No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT81.5151515151515151No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG71.3257575757575757No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGATACACCGAACCCCTAC40.7575757575757576No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGATCCCCTACC40.7575757575757576No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAA30.5681818181818182No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTACC20.3787878787878788No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGAACCCCTACC20.3787878787878788No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGATCCCCTACC20.3787878787878788No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAAC20.3787878787878788No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAAACCCTACCA10.1893939393939394No Hit
TCGATCGTTACCCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC10.1893939393939394No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAGCACCGAACCCCTACCA10.1893939393939394No Hit
ATCGATTCCTTGGTTCTTGTGGAAAAGACGAAACACCGAACCCCTACCAA10.1893939393939394No Hit
TAACATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.1893939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGAGAAACCCCGAACCCCTACCA10.1893939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATTCACCGATCCCCTACC10.1893939393939394No Hit
TAAGAAGGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.1893939393939394No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGAACCCCTACCA10.1893939393939394No Hit
TCGGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA10.1893939393939394No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCAACCAA10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGAAGAAACACCGAACCCCTAC10.1893939393939394No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTAGCAACTGGT10.1893939393939394No Hit
TAACAATGGTCTTTGGAAACGGACAAACAACCAAACCCATACCACAGGTG10.1893939393939394No Hit
CGATCATGATCGTCTTGCGGAAAGGACGAAACACCGAACCCCTACCAACT10.1893939393939394No Hit
GATCGACAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA10.1893939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGAAGAAACACCGAACCCCTACC10.1893939393939394No Hit
TATCAATTGTCTAGATGTTAGAACGAAACAAAGAACGAAAACCAACTTGT10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCTACC10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCATAC10.1893939393939394No Hit
ATCGATTCCTTTGTTCTTGTGGAAAGGACGAAACACCGAACCCCTAGCAA10.1893939393939394No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAGCAACAACGCAACCCGACCCA10.1893939393939394No Hit
TCGATCGTTACTATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC10.1893939393939394No Hit
TGTGCCTGAGTATGGTACAGCTAATGGCCGACAACCTTACCAAGCCCAGC10.1893939393939394No Hit
ACGAAAATAGTCAAGCAAAGCATAGGGATAAACAAAAAACCCCTCAAAAC10.1893939393939394No Hit
ACGATCGATAGGTAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACC10.1893939393939394No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGTACGAAACACCGAACCCCTACCAA10.1893939393939394No Hit
TAACAATGGTCTTGTGGAAAGGACTAAACACCTAACCCCTACCAACTGTT10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAGGACGAAACACCGAACCCCTACC10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTTC10.1893939393939394No Hit
TAACAATGGTCTTGTGGAAAGGACGAACACCGAACCCCTACCAACTGGTC10.1893939393939394No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCGTACCAACT10.1893939393939394No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT10.1893939393939394No Hit
ATACCTGGTCTTTCGTATTATGGCGTGAAGTCGCCGACTGAATGCCAGCA10.1893939393939394No Hit
TAAGTAGAGTCTTGTGAAGGACGAAACACCGAACCCCTACCAACTGGTCG10.1893939393939394No Hit
AAAAATTAAAATTTTTACCGCGACGGAGATAAAAACGCACACTAAATCTT10.1893939393939394No Hit
GATCGATAACGCATTTCCTGTGGAAAGGACGAAACACCGAACCCCTACCA10.1893939393939394No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCACAACCA10.1893939393939394No Hit
TCGATCGTTACATCTTGTGAAAGGACGAAACACCGAACCCCTACCAACTG10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCTCTAC10.1893939393939394No Hit
TAACAATGGCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.1893939393939394No Hit
TAACAATGGTCTTGTGGAAGGACGAAACACCGAACCCCTACCAACTGGTC10.1893939393939394No Hit
GATCGCGCGGTACTTGAGGCAGGGAAGAACGACAGAACGCCTACCAACAG10.1893939393939394No Hit
ACCATCCATACGTAAGAACTTGACGAAATCACGAAACACAGAACACAAAA10.1893939393939394No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT10.1893939393939394No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACTAAC10.1893939393939394No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTAACAA10.1893939393939394No Hit
CGATCGATACANGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTACC10.1893939393939394No Hit
ATCGATTCCTTGGTCTTGTGGAAAGGACGAAACACCGAACCGCTACCAAC10.1893939393939394No Hit
ACGATCGATAGGTAAGGTGTTGTGGAAAGGAGGAAACACCGAACCCCTAC10.1893939393939394No Hit
TAAGTAGAGTTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.1893939393939394No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTTCCAACT10.1893939393939394No Hit
GATCGATAACGCATTTCTTGGGGAAGGACGAAACACCGAACCCCTACTAA10.1893939393939394No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTTCCAACTGG10.1893939393939394No Hit
GATCGATAACGCATTTCTTGTGGAAAGGGACGATACACCGAACCCCTACC10.1893939393939394No Hit
ATATAGCTCTTTTTAAAACTCCAAAAAAACAGACCAAACGACCATATGAC10.1893939393939394No Hit
CGATCGATACAGCTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC10.1893939393939394No Hit
TCGATCGTTACCATCTTGTGGAAAGGCCGAAACACCGAACCCCTACCAAC10.1893939393939394No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTAGCAACTGGT10.1893939393939394No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCTCTACCAACTGGT10.1893939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCCAACCCCAACC10.1893939393939394No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGATCCCCTACC10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGATNNACNNAACNNNTAC10.1893939393939394No Hit
TTTTTGTCTGTGATTTTTTTTTTTTTTTAAAATTTAAGTTTTCATCCGGT10.1893939393939394No Hit
AGACATTTTTACTTTTTATGTCACTCATCGACACGAAAATGGAGAAAAGT10.1893939393939394No Hit
TACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGTC10.1893939393939394No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGAGGATACACCGAACCCCTAC10.1893939393939394No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)