FastQCFastQC Report
Tue 16 May 2023
H33GJBGXT_n01_R22_h0rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33GJBGXT_n01_R22_h0rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences670
Sequences flagged as poor quality0
Sequence length151
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA9514.17910447761194No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA9113.582089552238804No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC8512.686567164179104No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC8112.08955223880597No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT619.104477611940299No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC619.104477611940299No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT598.805970149253731No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT253.731343283582089No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGATACACCGAACCCCTAC111.6417910447761193No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG101.4925373134328357No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG71.0447761194029852No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTACC40.5970149253731344No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAA30.44776119402985076No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGAACCCCTACC30.44776119402985076No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCGCTACCAAC30.44776119402985076No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGAACCCCTACCA20.2985074626865672No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTATC20.2985074626865672No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGATCCCCTACC20.2985074626865672No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGATCCCCTACC20.2985074626865672No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT20.2985074626865672No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAAC20.2985074626865672No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTAGCA10.1492537313432836No Hit
GATCGCGCGGTTCTTGTGGCAAGGACGAAACACCGAACCCCTACCAACTG10.1492537313432836No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTAACA10.1492537313432836No Hit
TCGATCGTTACCATCTTGAGGAAAGGACGAAACACCGAACCCATACCAAC10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCTTGGGAAAAGGCGAAACCCCCAAACCCCACC10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGCACCCCTACC10.1492537313432836No Hit
CGCTCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAAGGACGAAACACCGAACCCCTAC10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAGGGCGGAACACCCAACCCCTACCA10.1492537313432836No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCAACCA10.1492537313432836No Hit
GAACGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA10.1492537313432836No Hit
ATACACGATCTCTTGTGAAAAGGACGAAACACCGAACCCCTACCAACTGG10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCATCCA10.1492537313432836No Hit
CGATCATGATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACG10.1492537313432836No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTAGCAACTGGT10.1492537313432836No Hit
GATCGCGCCGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG10.1492537313432836No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCACCT10.1492537313432836No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCAACCAACAGGT10.1492537313432836No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAGT10.1492537313432836No Hit
ACATCGTTAACATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT10.1492537313432836No Hit
GATCGATAACTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.1492537313432836No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAACCCCAACCGGC10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTAGC10.1492537313432836No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACAAA10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCTAGTGGAAAGGACGAAACACCGAACCCCTAC10.1492537313432836No Hit
TCGATCGTTACCATCTTGCGGAAAGGACGAAACACCGAACCCCTACCAAC10.1492537313432836No Hit
CGATCTTGAGCGTCTTGTGGAAAGGACGAAACACCGAACCCTACCAACAG10.1492537313432836No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAAACCCATACAAA10.1492537313432836No Hit
TAACTATAGTCTTGTGGAAAGGACAAAACCCCAAACCCGAACCAAATGGA10.1492537313432836No Hit
GATAGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTGCC10.1492537313432836No Hit
CGATCGATAGAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC10.1492537313432836No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCTTACCAACTGGT10.1492537313432836No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAGGAACCCCGTAACCCGTCCCA10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCTTGTGGAGGGGCGGATCACCGAAACCCTTAC10.1492537313432836No Hit
CGATCATGATCGTCTTGTGGAAGGGAGGAAACCCGAAACCCGTCCCACGT10.1492537313432836No Hit
GGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGAAAAGGACGAAACACCGAACCCCTACC10.1492537313432836No Hit
TAAGTATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGAGAAACAACGAAACCCAACCA10.1492537313432836No Hit
GATCGATAACGCATTTCCTGTGGAAAGGACGAAACTCCGAACCCCTACCA10.1492537313432836No Hit
CGATCATGATCGTCTTGTGAAAAGGACGAAACACCGAACCCCTACCAACT10.1492537313432836No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCAACCAAC10.1492537313432836No Hit
ACGATCGATAGGTAAAGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC10.1492537313432836No Hit
ATACACGATCTCTTGTAGAAAGGACGAAACACCGAACCCCTACCAACTGG10.1492537313432836No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGAGGAAACACCGAACCCATACAAC10.1492537313432836No Hit
CGTTCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGATCCCCTACC10.1492537313432836No Hit
TCGATCGTTACCATCTTTGGAAAGGACGAAACACCGAACCCCAACCAACA10.1492537313432836No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAAATCCGAACGCCTACCAA10.1492537313432836No Hit
CGATCGATACAGGTATTCTTGTGGAAATGACGAAACACCGAACCCCTACC10.1492537313432836No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAAGACCGAACCCCTACCA10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCNTGTGGAAAGGACGAAACACCGAACCCCTAC10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGTTACACCGAACCCCTAC10.1492537313432836No Hit
CGATCATGATCGTCTAGTGGAAAGGACGAAACACCGAACCCCTACCAAAT10.1492537313432836No Hit
ATCGATTCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC10.1492537313432836No Hit
TCGATCGTTACCATCTTGAGGAAAGCACGAAACACCGAACCCCAACCAAC10.1492537313432836No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAGGGCGGAAAACCCAAACCCTTCC10.1492537313432836No Hit
CGATCATGATCGTCTTGTGGAAAGGACGGAACACCGAAACCCTTCCCACG10.1492537313432836No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)