FastQCFastQC Report
Tue 16 May 2023
H33GJBGXT_n01_R18_h14d14rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33GJBGXT_n01_R18_h14d14rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences223
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT8739.01345291479821No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG5323.766816143497756No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG4921.973094170403588No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTTCCAACTGG73.1390134529147984No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT62.690582959641256No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTAGCAACTGGT31.345291479820628No Hit
TAAGTAGAGTCTTGTGGAAAAGGACGAAACACCGAACCCCTACCAACTGG10.4484304932735426No Hit
TAAGAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.4484304932735426No Hit
GCTCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG10.4484304932735426No Hit
GTAGTTGCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCCTCTGGT10.4484304932735426No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC10.4484304932735426No Hit
TAAGAATAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.4484304932735426No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTCCCAACTG10.4484304932735426No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC10.4484304932735426No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTA10.4484304932735426No Hit
TAAGTAGCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.4484304932735426No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTAGT10.4484304932735426No Hit
TAAGTAGCGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT10.4484304932735426No Hit
TAAGTGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGTC10.4484304932735426No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCAACCAACAGG10.4484304932735426No Hit
TAAGAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.4484304932735426No Hit
GTTCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG10.4484304932735426No Hit
ATACACGATCTCTTGTGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.4484304932735426No Hit
ATACACGATCCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT10.4484304932735426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)