FastQCFastQC Report
Tue 16 May 2023
H33GJBGXT_n01_R15_d14rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33GJBGXT_n01_R15_d14rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1757
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA29016.505406943653956No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA21412.17985202048947No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC19310.984632896983495No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC1739.846328969834946No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT1588.992601024473535No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT1538.708025042686398No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC1518.594194649971543No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT221.2521343198634036No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGATACACCGAACCCCTAC181.024473534433694No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT170.9675583380762665No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAA130.7398975526465565No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGATCCCCTACC120.6829823562891292No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG120.6829823562891292No Hit
TAAGTATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT120.6829823562891292No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTACC90.512236767216847No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGATCCCCTACC80.4553215708594195No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG80.4553215708594195No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAAC80.4553215708594195No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGAACCCCTACCA60.3414911781445646No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGAACCCCTACC40.22766078542970974No Hit
TAAGTATCGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT30.1707455890722823No Hit
TATCTATGGACAAGAGGTTTGCACGTAAGACCCAACGCCAACCTACACCA30.1707455890722823No Hit
GCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC20.11383039271485487No Hit
TCGATCGTTACAATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC20.11383039271485487No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATTCACCGAACCCCTACC20.11383039271485487No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTATCAACTGGT20.11383039271485487No Hit
CGATCATGATCGTCTTGTGGAAAGAACGAAACACCGAACCCCTACCAACT20.11383039271485487No Hit
GATCGATAACGCATTTCTTGTGGAAATGACGAAACACCGAACCCCTACCA20.11383039271485487No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTAAC20.11383039271485487No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTAGC20.11383039271485487No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCACTACCA20.11383039271485487No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACAAAC20.11383039271485487No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTAACAA20.11383039271485487No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACA20.11383039271485487No Hit
CGATCGATACAGGTATTCTTGGGGAAAGGACGAAACACCGAACCCCTACC20.11383039271485487No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGA20.11383039271485487No Hit
GATCGATAACGCATTTCTTGTGTAAAGGACGAAACACCGAACCCCTACCA20.11383039271485487No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCGAA20.11383039271485487No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGATCCCCTACC20.11383039271485487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)