FastQCFastQC Report
Tue 16 May 2023
H33GJBGXT_n01_R14_d7rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH33GJBGXT_n01_R14_d7rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185
Sequences flagged as poor quality0
Sequence length151
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA4323.243243243243246No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA2211.891891891891893No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC2010.81081081081081No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC189.72972972972973No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC179.18918918918919No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT158.108108108108109No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT115.9459459459459465No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGAACCCCTACCA63.2432432432432434No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGATACACCGAACCCCTAC31.6216216216216217No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTACC21.0810810810810811No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT21.0810810810810811No Hit
ATCGATTCCTTGGTTCTAGTGGAAAGGACGAAACACATAACACCTACAAA10.5405405405405406No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACAA10.5405405405405406No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACACCTACCGGCCGGG10.5405405405405406No Hit
ACGATCGATAGGTAAGGTCTTTGGAAAGGACGAAACACCGAAACCCTTCC10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAGGGAGGGAAACCGTAACCCGTCCC10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACTAAACACCGAACCCCTACC10.5405405405405406No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACAGAACCCCTACCA10.5405405405405406No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGATCCCCTACCAACTGGT10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATACACCGAACCCCTACC10.5405405405405406No Hit
TAACAATGGTCTTGTGGAAAGGACGAACACCCGAACCCGTCCAACCTGTG10.5405405405405406No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTCCCAACTGGT10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGATCCCCTACC10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGAACCCCTATC10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGAAGAAACACCGAACCCCTACC10.5405405405405406No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATGACCGAACCCCTACCA10.5405405405405406No Hit
GGGTCGATACAGGTATTCTTGTGGAAAGGACGATTCACCGATCCCCTACC10.5405405405405406No Hit
GATCGATAACGCATTTCTTGTGGGAAGGGAGGATAACCCTAACCCGTCCC10.5405405405405406No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAAGACCGAACCCCTACCA10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGATTCACCGAACCCCTACC10.5405405405405406No Hit
GATCGATAACGCATTTTTGTGGAAAGGACGAAACACCGAACCCCTACCAA10.5405405405405406No Hit
GATCGATCACGCATTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCA10.5405405405405406No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGGCGAAACACCGAACCCCTACCAA10.5405405405405406No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAACCCCTACCAAC10.5405405405405406No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAATCACCGATCCCCTACC10.5405405405405406No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTAACAACT10.5405405405405406No Hit
CGTTCGATACAGGTATTCTTGTGGAAAGGACGATACACCGAACCCCTACC10.5405405405405406No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)