H32MNAFXY_n01_zt2wtlarvs63.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H32MNAFXY_n01_zt2wtlarvs63.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1847110
Sequences flagged as poor quality	0
Sequence length	75
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGG	8343	0.4516785681415833	TruSeq Adapter, Index 10 (96% over 28bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7811	0.42287681838114677	No Hit
ATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG	3998	0.21644623222222825	TruSeq Adapter, Index 10 (96% over 28bp)
ACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGG	2017	0.10919761140376046	RNA PCR Primer, Index 10 (96% over 28bp)
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGGGG	2015	0.10908933414902199	TruSeq Adapter, Index 10 (96% over 28bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2690	33.986282	45
CCGTCTT	2740	33.366093	47
ATGCCGT	2785	33.074715	44
CTTGAAA	2935	31.854532	57
GTCTTCT	2930	31.555656	49
CTTCTGC	2965	31.299519	51
GTATGCC	2945	31.277788	42
TCTTCTG	2955	31.171942	50
TATGCCG	2955	31.171942	43
GCCGTCT	2930	31.084677	46
TGCTTGA	3000	31.049353	55
TTCTGCT	3005	30.99769	52
CTGCTTG	3035	30.804962	54
TCTGCTT	3030	30.741936	53
CGTCTTC	3020	30.501022	48
GCTTGAA	3100	30.15905	56
TCTCGTA	2830	29.135437	38
CTCGTAT	3005	28.816372	39
TCGTATG	3310	27.724497	40
TGAAAAA	3475	27.202312	59