H32MNAFXY_n01_zt2wtlarvs23.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H32MNAFXY_n01_zt2wtlarvs23.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	636310
Sequences flagged as poor quality	0
Sequence length	75
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3128	0.4915842906759284	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGG	2584	0.40609137055837563	RNA PCR Primer, Index 17 (96% over 28bp)
ATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG	1204	0.1892159482013484	RNA PCR Primer, Index 17 (96% over 28bp)
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGGGG	967	0.15196995175307632	RNA PCR Primer, Index 17 (96% over 28bp)
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGC	775	0.12179597994688124	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT	677	0.10639468183746917	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATATA	35	0.0013476593	39.42682	41
CACTATA	35	0.0013476593	39.42682	39
GTATGCC	1135	0.0	34.346493	42
GCTTGAA	1170	0.0	33.908752	56
GTCTTCT	1090	0.0	33.54897	49
TGCTTGA	1175	0.0	33.47085	55
TATGCCG	1175	0.0	33.47085	43
CCGTCTT	1135	0.0	33.43464	47
ATGCCGT	1190	0.0	33.048954	44
AGGATAT	220	0.0	32.932945	34
CTTCTGC	1135	0.0	32.522785	51
GGATATA	170	0.0	32.4717	35
TGCCGTC	1175	0.0	32.296436	45
GCCGTCT	1200	0.0	31.623596	46
CGTCTTC	1180	0.0	31.282509	48
CTTGAAA	1315	0.0	30.694454	57
CCTATAT	45	0.00462216	30.665304	2
TCTCGTA	1130	0.0	30.532017	38
TCTTCTG	1215	0.0	30.381369	50
CTCGTAT	1125	0.0	30.35865	39