H2YVKBGXB_n01_mb185.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2YVKBGXB_n01_mb185.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38554301
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC	121926	0.31624487239439253	TruSeq Adapter, Index 2 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTA	5505	63.957005	41
TATCGCG	7765	62.876953	39
CGCGTAT	5760	62.036427	42
CGATGTA	34405	61.87772	34
ATCGCGT	6825	61.690105	40
CACCGAT	35235	60.907536	31
ACCGATG	35210	60.84166	32
CCGATGT	35190	60.58746	33
CGTATGC	20045	59.86933	44
TCTCGTA	17525	59.671925	41
GTATCGC	8525	59.530052	38
CTCGTAT	17660	59.5125	42
TCGTATG	16685	59.4033	43
TATCTCG	20815	59.220444	39
ATGCCGT	18675	59.163612	47
GTCACCG	36850	58.43773	29
TCACCGA	37370	57.632298	30
TATGCCG	21790	57.59619	46
TGCCGTC	18455	57.157066	48
ATCTCGT	20580	56.069427	40