H2YNTBGXB_n01_8_NLP7_bio_50.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2YNTBGXB_n01_8_NLP7_bio_50.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12796183
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGC	1531410	11.967709433352118	TruSeq Adapter, Index 8 (100% over 50bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATG	181504	1.4184229781646605	TruSeq Adapter, Index 8 (100% over 49bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	81818	0.6393937942275443	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATATCGTATGC	27211	0.2126493502007591	TruSeq Adapter, Index 8 (98% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCGCGTATGC	21101	0.16490073641491373	TruSeq Adapter, Index 8 (98% over 50bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGCC	15022	0.11739438237168068	TruSeq Adapter, Index 8 (100% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATTC	13206	0.1032026503528435	TruSeq Adapter, Index 8 (98% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGGATGC	12944	0.10115516478624915	TruSeq Adapter, Index 8 (98% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAAGGG	190425	66.39799	70
TCTCGTA	197320	59.973278	41
CTCGTAT	197750	59.925823	42
TCGTATG	200480	59.738266	43
CGTATGC	203030	59.6004	44
TATGCCG	202990	59.54285	46
GCCGTCT	197185	59.507027	49
CCGTCTT	198975	59.461864	50
ATCTCGT	199685	59.372475	40
GTATGCC	204915	59.296383	45
ATGCCGT	202505	59.172592	47
AATCTCG	200490	59.015377	39
AAAAAGG	214975	58.949368	69
CGTCTTC	198690	58.935043	51
TGCCGTC	202515	58.674915	48
CTGCTTG	196200	58.544685	57
TGCTTGA	198205	58.498165	58
GTCTTCT	198100	58.374474	52
TTCTGCT	197320	58.216614	55
CTTCTGC	200555	58.196003	54