H2YNTBGXB_n01_17_BZIP1_ab_R1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2YNTBGXB_n01_17_BZIP1_ab_R1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4081900
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATGC	372866	9.134618682476297	TruSeq Adapter, Index 3 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	30840	0.7555305127514148	No Hit
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATG	26982	0.6610157034714227	TruSeq Adapter, Index 3 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATGCC	12157	0.2978269923320022	TruSeq Adapter, Index 3 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGCTCTCGTATGC	4686	0.11479948063401847	TruSeq Adapter, Index 3 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAAGGG	46545	64.50192	70
TCTCGTA	48155	61.326744	41
CGTATGC	48975	61.202614	44
TATGCCG	49000	61.150707	46
GCCGTCT	48880	61.144047	49
GTATGCC	49020	61.11073	45
ATCTCGT	47740	61.098164	40
ATGCCGT	49095	61.01174	47
CCGTCTT	48955	60.943882	50
TGCCGTC	49080	60.931293	48
GCTTGAA	49055	60.851913	59
TGCTTGA	49120	60.735752	58
CTTGAAA	49395	60.55426	60
CTCGTAT	49425	60.26932	42
TCGTATG	49975	60.075996	43
CTGCTTG	49810	59.80934	57
AGAGATC	47300	59.645756	36
ACGTAGA	48290	59.61083	32
TCTGCTT	50075	59.508995	56
GTCACGT	49245	59.441216	29