FastQCFastQC Report
Tue 20 Dec 2022
H2Y7MAFX5_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2Y7MAFX5_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences213199937
Sequences flagged as poor quality0
Sequence length10
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAATGGTTT12681623259.482302755089464No Hit
TATCAGCCTA7412325534.76701543302989No Hit
GGGGGGGGGG39273051.8420760602757589No Hit
AGAATGGTTA4647750.21799959537511493No Hit
TATCCGCCTA4135330.19396487907967816No Hit
AGAATGTTTA2660130.12477161285465108No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)