FastQCFastQC Report
Wed 19 Apr 2023
H2WN3BGXT_n01_br320.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2WN3BGXT_n01_br320.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTAAAATAGAGCTCTGATTTCAATAAGCGGGTCTGGCGTCCTGGCACA211.76470588235294No Hit
TCTCTGGGTTCCCAGAGTGTCTCTAAGAGTCAAGTGTTGGGGTTGGGGAT211.76470588235294No Hit
CCGTAACGATAGCCCTCCACTTAGCTAGGTTGCCTCTGCCTTCTATAACT15.88235294117647No Hit
ATGTACCTTTTAGAAGCGCAAAGTCCAAGGCCGAGGTGAACTTCAGGTCA15.88235294117647No Hit
CTACTAGTTTGGTCTCATTACAGTTAACATTTTATGGGGTGGCGGGAGGG15.88235294117647No Hit
GTGTATCAGTTTCTTTTTTAACTTAATTTTATTTTTTAGTAATTTATTAC15.88235294117647No Hit
CCGTGATCACAGACAAACCTGCACGTCAGGAGGGGAATAGGTTTCAGTGT15.88235294117647No Hit
TCTCTAGTCAGTTCTGTGTGGTTCTAAGTGAAATCAATCACGGCTCAGTT15.88235294117647No Hit
GTGTGATCACGCTACTTAAAGCTATCATGTAGTAGAAAGGAACAGAGGAT15.88235294117647No Hit
ACGTAACACTTTCGGGTACTATATGATGAGGCCCTGGGTTTGATCGATCA15.88235294117647No Hit
TATGTGCTAAGTCTCCCCACTGGGTGTCAGAGATGATGTTTTTTAGGAAT15.88235294117647No Hit
ACGTAACACTTTCGGGTACTATATGATGAGGCCCTGGGTTTGATCGATCC15.88235294117647No Hit
ATGTCTTGCTTTTATTCCAAACAAAGCTCTGAAGGAAGTCTGGGTGTGAT15.88235294117647No Hit
TGCTAAAATAGAGCTCTGATTACATAAGGCGGGACGGGCTGCAGGCCCAA15.88235294117647No Hit
GGGTGTAACCTAGAGGCTTGGAAACCCAAGTCCCTGAGGCTAAGGCTCCC15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)