FastQCFastQC Report
Thu 7 Apr 2022
H2WMTDRX2_n01_GDO_C_220401.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2WMTDRX2_n01_GDO_C_220401.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences202897976
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCAGAGCTATGCTGGAATTCTCG54130722.667878756957142No Hit
GGGTCTGAGCTATGCTGGAATTCTCG24426771.20389421725922No Hit
TTTACTGAGCTATGCTGGAATTCTCG7626380.375872650400416No Hit
CCTTACGAGCTATGCTGGAATTCTCG5840850.28787127970167625No Hit
GTTACAGAGCTATGCTGGAATTCTCG4001280.19720650145864443No Hit
TGTTCCGAGCTATGCTGGAATTCTCG3627410.17877999926426077No Hit
TTCTTAGAGCTATGCTGGAATTCTCG3131810.15435393007567508No Hit
ACACCGGAGCTATGCTGGAATTCTCG3115180.15353430632546083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)