FastQCFastQC Report
Thu 7 Apr 2022
H2WMTDRX2_n01_GDO_B_220401.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2WMTDRX2_n01_GDO_B_220401.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119777888
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAAGAGCTATGCTGGAATTCTCG6178540.5158331060237096No Hit
CTGTTTAAGAGCTATGCTGGAATTCT2279380.19030056699613873No Hit
CGCTGGAATTCTCGGGTGCCAAGGAA2204210.18402478427403896RNA PCR Primer, Index 1 (100% over 23bp)
TGGCCAGAGCTATGCTGGAATTCTCG1835640.15325366231202875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)