FastQCFastQC Report
Thu 7 Apr 2022
H2WMTDRX2_n01_GDO_A_220401.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2WMTDRX2_n01_GDO_A_220401.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences251449856
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGAAGAGCTATGCTGGAATTCTCG11344660.4511698746011611No Hit
TTCTTAGAGCTATGCTGGAATTCTCG6433530.25585737460116104No Hit
GCATGCGAGCTATGCTGGAATTCTCG4629560.18411464113147077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)