H2NL2AFXY_n01_DGY2135.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H2NL2AFXY_n01_DGY2135.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69042
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTGT	40	0.0024043708	34.998188	6
TGCCCAA	55	2.965494E-4	31.816534	10
CCATCTA	45	0.004266622	31.132061	69
GCCCAAT	45	0.0042818054	31.1095	11
ATACTGT	45	0.0042818054	31.1095	6
CTGCCCA	45	0.0042818054	31.1095	9
ATATGAT	50	0.0071660364	27.99855	3
ATAGTAT	50	0.0071660364	27.99855	3
CGATATC	50	0.0071660364	27.99855	32
TCAAAGC	50	0.0071660364	27.99855	53
TATACTG	75	5.5153683E-5	27.998549	5
TGTTATC	75	0.0018162552	23.332125	2
GTTATAT	80	0.0026428623	21.873867	1
ATATACT	90	0.005229312	19.443438	4