[2023-02-11 04:55:16,359] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-02-11 04:55:16,359] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-02-11 04:55:16,359] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-02-11 04:55:16,361] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-02-11 04:55:16,361] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-02-11 04:55:16,362] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2MTYDSX5/1 [2023-02-11 04:55:17,905] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-02-11 04:55:17,905] multiqc [INFO ] This is MultiQC v1.9 [2023-02-11 04:55:17,905] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2MTYDSX5/1 [2023-02-11 04:55:17,905] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/H2MTYDSX5/1 [2023-02-11 04:55:17,905] multiqc [INFO ] Template : default [2023-02-11 04:55:17,905] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-02-11 04:55:17,905] multiqc [INFO ] Searching : /scratch/gencore/logs/html/H2MTYDSX5/1 [2023-02-11 04:55:17,906] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-02-11 04:55:17,906] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-30086594/tmpo0jq0_x_ [2023-02-11 04:55:18,049] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_001DNASeq_fastqc.html [2023-02-11 04:55:18,052] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_001DNASeq_fastqc.html [2023-02-11 04:55:18,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_002DNAseq_fastqc.html [2023-02-11 04:55:18,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_002DNAseq_fastqc.html [2023-02-11 04:55:18,169] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_001DNAseq_fastqc.html [2023-02-11 04:55:18,171] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_001DNAseq_fastqc.html [2023-02-11 04:55:18,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_undetermined_fastqc.html [2023-02-11 04:55:18,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_undetermined_fastqc.html [2023-02-11 04:55:18,279] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_002DNAseq_fastqc.html [2023-02-11 04:55:18,281] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_002DNAseq_fastqc.html [2023-02-11 04:55:18,340] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_004DNAseq_fastqc.html [2023-02-11 04:55:18,341] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_004DNAseq_fastqc.html [2023-02-11 04:55:18,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_003DNAseq_fastqc.html [2023-02-11 04:55:18,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N1_003DNAseq_fastqc.html [2023-02-11 04:55:18,447] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_001DNASeq_fastqc.html [2023-02-11 04:55:18,449] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_001DNASeq_fastqc.html [2023-02-11 04:55:18,520] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.001DNAseq_fastqc.html [2023-02-11 04:55:18,521] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.001DNAseq_fastqc.html [2023-02-11 04:55:18,577] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_004DNAseq_fastqc.html [2023-02-11 04:55:18,579] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_004DNAseq_fastqc.html [2023-02-11 04:55:18,638] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_undetermined_fastqc.html [2023-02-11 04:55:18,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_undetermined_fastqc.html [2023-02-11 04:55:18,689] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_003DNAseq_fastqc.html [2023-02-11 04:55:18,691] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_003DNAseq_fastqc.html [2023-02-11 04:55:18,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_004DNAseq_fastqc.html [2023-02-11 04:55:18,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_004DNAseq_fastqc.html [2023-02-11 04:55:18,818] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_003DNAseq_fastqc.html [2023-02-11 04:55:18,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_003DNAseq_fastqc.html [2023-02-11 04:55:18,874] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.002DNAseq_fastqc.html [2023-02-11 04:55:18,876] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.002DNAseq_fastqc.html [2023-02-11 04:55:18,933] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_004DNAseq_fastqc.html [2023-02-11 04:55:18,935] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_004DNAseq_fastqc.html [2023-02-11 04:55:18,988] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_003DNAseq_fastqc.html [2023-02-11 04:55:18,990] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_WT_003DNAseq_fastqc.html [2023-02-11 04:55:19,037] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.003DNAseq_fastqc.html [2023-02-11 04:55:19,039] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.003DNAseq_fastqc.html [2023-02-11 04:55:19,095] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.002DNAseq_fastqc.html [2023-02-11 04:55:19,097] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.002DNAseq_fastqc.html [2023-02-11 04:55:19,159] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.004DNAseq_fastqc.html [2023-02-11 04:55:19,160] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N3.004DNAseq_fastqc.html [2023-02-11 04:55:19,220] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.001DNAseq_fastqc.html [2023-02-11 04:55:19,222] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.001DNAseq_fastqc.html [2023-02-11 04:55:19,292] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_001DNAseq_fastqc.html [2023-02-11 04:55:19,294] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_001DNAseq_fastqc.html [2023-02-11 04:55:19,347] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_002DNAseq_fastqc.html [2023-02-11 04:55:19,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_WT_002DNAseq_fastqc.html [2023-02-11 04:55:19,403] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.004DNAseq_fastqc.html [2023-02-11 04:55:19,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.004DNAseq_fastqc.html [2023-02-11 04:55:19,473] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.003DNAseq_fastqc.html [2023-02-11 04:55:19,475] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n02_N3.003DNAseq_fastqc.html [2023-02-11 04:55:19,541] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_002DNAseq_fastqc.html [2023-02-11 04:55:19,543] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2MTYDSX5_l01_n01_N1_002DNAseq_fastqc.html [2023-02-11 04:55:19,966] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-02-11 04:55:19,968] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-02-11 04:55:19,976] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-02-11 04:55:19,983] multiqc.modules.custom_content.custom_content [INFO ] demux_report-1: Found 13 samples (table) [2023-02-11 04:55:19,993] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-02-11 04:55:19,998] multiqc [DEBUG ] No samples found: conpair [2023-02-11 04:55:20,004] multiqc [DEBUG ] No samples found: peddy [2023-02-11 04:55:20,010] multiqc [DEBUG ] No samples found: somalier [2023-02-11 04:55:20,015] multiqc [DEBUG ] No samples found: methylQA [2023-02-11 04:55:20,026] multiqc [DEBUG ] No samples found: mosdepth [2023-02-11 04:55:20,031] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-02-11 04:55:20,036] multiqc [DEBUG ] No samples found: qualimap [2023-02-11 04:55:20,042] multiqc [DEBUG ] No samples found: preseq [2023-02-11 04:55:20,049] multiqc [DEBUG ] No samples found: quast [2023-02-11 04:55:20,056] multiqc [DEBUG ] No samples found: qorts [2023-02-11 04:55:20,062] multiqc [DEBUG ] No samples found: rna_seqc [2023-02-11 04:55:20,069] multiqc [DEBUG ] No samples found: rockhopper [2023-02-11 04:55:20,074] multiqc [DEBUG ] No samples found: rsem [2023-02-11 04:55:20,090] multiqc [DEBUG ] No samples found: rseqc [2023-02-11 04:55:20,095] multiqc [DEBUG ] No samples found: busco [2023-02-11 04:55:20,100] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-02-11 04:55:20,105] multiqc [DEBUG ] No samples found: disambiguate [2023-02-11 04:55:20,112] multiqc [DEBUG ] No samples found: supernova [2023-02-11 04:55:20,133] multiqc [DEBUG ] No samples found: deeptools [2023-02-11 04:55:20,139] multiqc [DEBUG ] No samples found: sargasso [2023-02-11 04:55:20,145] multiqc [DEBUG ] No samples found: verifybamid [2023-02-11 04:55:20,151] multiqc [DEBUG ] No samples found: mirtrace [2023-02-11 04:55:20,156] multiqc [DEBUG ] No samples found: happy [2023-02-11 04:55:20,162] multiqc [DEBUG ] No samples found: mirtop [2023-02-11 04:55:20,169] multiqc [DEBUG ] No samples found: homer [2023-02-11 04:55:20,175] multiqc [DEBUG ] No samples found: macs2 [2023-02-11 04:55:20,180] multiqc [DEBUG ] No samples found: theta2 [2023-02-11 04:55:20,186] multiqc [DEBUG ] No samples found: snpeff [2023-02-11 04:55:20,193] multiqc [DEBUG ] No samples found: gatk [2023-02-11 04:55:20,202] multiqc [DEBUG ] No samples found: htseq [2023-02-11 04:55:20,209] multiqc [DEBUG ] No samples found: bcftools [2023-02-11 04:55:20,216] multiqc [DEBUG ] No samples found: featureCounts [2023-02-11 04:55:20,224] multiqc [DEBUG ] No samples found: fgbio [2023-02-11 04:55:20,241] multiqc [DEBUG ] No samples found: dragen [2023-02-11 04:55:20,246] multiqc [DEBUG ] No samples found: dedup [2023-02-11 04:55:20,253] multiqc [DEBUG ] No samples found: damageprofiler [2023-02-11 04:55:20,284] multiqc [DEBUG ] No samples found: biobambam2 [2023-02-11 04:55:20,290] multiqc [DEBUG ] No samples found: mtnucratio [2023-02-11 04:55:20,292] multiqc [DEBUG ] No samples found: picard [2023-02-11 04:55:20,297] multiqc [DEBUG ] No samples found: prokka [2023-02-11 04:55:20,304] multiqc [DEBUG ] No samples found: samblaster [2023-02-11 04:55:20,318] multiqc [DEBUG ] No samples found: samtools [2023-02-11 04:55:20,324] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-02-11 04:55:20,332] multiqc [DEBUG ] No samples found: bamtools [2023-02-11 04:55:20,339] multiqc [DEBUG ] No samples found: jellyfish [2023-02-11 04:55:20,350] multiqc [DEBUG ] No samples found: vcftools [2023-02-11 04:55:20,358] multiqc [DEBUG ] No samples found: longranger [2023-02-11 04:55:20,364] multiqc [DEBUG ] No samples found: stacks [2023-02-11 04:55:20,370] multiqc [DEBUG ] No samples found: varscan2 [2023-02-11 04:55:20,392] multiqc [DEBUG ] No samples found: bbmap [2023-02-11 04:55:20,398] multiqc [DEBUG ] No samples found: bismark [2023-02-11 04:55:20,404] multiqc [DEBUG ] No samples found: biscuit [2023-02-11 04:55:20,410] multiqc [DEBUG ] No samples found: hicexplorer [2023-02-11 04:55:20,416] multiqc [DEBUG ] No samples found: hicup [2023-02-11 04:55:20,423] multiqc [DEBUG ] No samples found: hicpro [2023-02-11 04:55:20,427] multiqc [DEBUG ] No samples found: salmon [2023-02-11 04:55:20,432] multiqc [DEBUG ] No samples found: kallisto [2023-02-11 04:55:20,439] multiqc [DEBUG ] No samples found: slamdunk [2023-02-11 04:55:20,446] multiqc [DEBUG ] No samples found: star [2023-02-11 04:55:20,452] multiqc [DEBUG ] No samples found: hisat2 [2023-02-11 04:55:20,457] multiqc [DEBUG ] No samples found: tophat [2023-02-11 04:55:20,463] multiqc [DEBUG ] No samples found: bowtie2 [2023-02-11 04:55:20,469] multiqc [DEBUG ] No samples found: bowtie1 [2023-02-11 04:55:20,476] multiqc [DEBUG ] No samples found: snpsplit [2023-02-11 04:55:20,483] multiqc [DEBUG ] No samples found: kat [2023-02-11 04:55:20,489] multiqc [DEBUG ] No samples found: leehom [2023-02-11 04:55:20,494] multiqc [DEBUG ] No samples found: adapterRemoval [2023-02-11 04:55:20,499] multiqc [DEBUG ] No samples found: clipandmerge [2023-02-11 04:55:20,504] multiqc [DEBUG ] No samples found: cutadapt [2023-02-11 04:55:20,509] multiqc [DEBUG ] No samples found: flexbar [2023-02-11 04:55:20,514] multiqc [DEBUG ] No samples found: kaiju [2023-02-11 04:55:20,522] multiqc [DEBUG ] No samples found: kraken [2023-02-11 04:55:20,526] multiqc [DEBUG ] No samples found: malt [2023-02-11 04:55:20,531] multiqc [DEBUG ] No samples found: trimmomatic [2023-02-11 04:55:20,536] multiqc [DEBUG ] No samples found: sickle [2023-02-11 04:55:20,543] multiqc [DEBUG ] No samples found: skewer [2023-02-11 04:55:20,549] multiqc [DEBUG ] No samples found: sortmerna [2023-02-11 04:55:20,554] multiqc [DEBUG ] No samples found: biobloomtools [2023-02-11 04:55:20,560] multiqc [DEBUG ] No samples found: fastq_screen [2023-02-11 04:55:20,565] multiqc [DEBUG ] No samples found: afterqc [2023-02-11 04:55:20,570] multiqc [DEBUG ] No samples found: fastp [2023-02-11 04:55:25,527] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports [2023-02-11 04:55:25,799] multiqc [DEBUG ] No samples found: pycoqc [2023-02-11 04:55:25,805] multiqc [DEBUG ] No samples found: minionqc [2023-02-11 04:55:25,810] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-02-11 04:55:25,816] multiqc [DEBUG ] No samples found: clusterflow [2023-02-11 04:55:25,823] multiqc [DEBUG ] No samples found: bcl2fastq [2023-02-11 04:55:25,829] multiqc [DEBUG ] No samples found: interop [2023-02-11 04:55:25,836] multiqc [DEBUG ] No samples found: ivar [2023-02-11 04:55:25,841] multiqc [DEBUG ] No samples found: flash [2023-02-11 04:55:25,846] multiqc [DEBUG ] No samples found: seqyclean [2023-02-11 04:55:25,846] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-02-11 04:55:25,846] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Lane 1 Demultiplexing Report'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Lane Statistics'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-02-11 04:55:25,847] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-02-11 04:55:25,880] multiqc [INFO ] Compressing plot data [2023-02-11 04:55:26,314] multiqc [INFO ] Report : multiqc_report.html [2023-02-11 04:55:26,314] multiqc [INFO ] Data : multiqc_data [2023-02-11 04:55:26,315] multiqc [DEBUG ] Moving data file from '/state/partition1/job-30086594/tmpo0jq0_x_/multiqc_data' to '/scratch/gencore/logs/html/H2MTYDSX5/1/multiqc_data' [2023-02-11 04:55:26,455] multiqc [INFO ] MultiQC complete